Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0840
         (432 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   2.9  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   3.8  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   3.8  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   3.8  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   3.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 343  PSKRRTSWSVLLN 381
            PSK R  W+VLLN
Sbjct: 1118 PSKIRICWNVLLN 1130


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 277 LIFLNAASVHLCTKARLLG*LGARVKHQRLDDE 179
           LIFL+     LC +A     L   +K  R D+E
Sbjct: 150 LIFLSFRCTKLCKEANKTAFLWYHIKIDREDEE 182


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 253 RRLHSEILKQSQSVL 297
           RRLH E L+ S  VL
Sbjct: 59  RRLHEEFLRSSVDVL 73


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 37  VFCHCSDRASL 5
           VFC CS +ASL
Sbjct: 298 VFCDCSHQASL 308


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 37  VFCHCSDRASL 5
           VFC CS +ASL
Sbjct: 298 VFCDCSHQASL 308


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 37  VFCHCSDRASL 5
           VFC CS +ASL
Sbjct: 298 VFCDCSHQASL 308


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,729
Number of Sequences: 336
Number of extensions: 1985
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)