Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0840
         (432 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical pr...   168   2e-42
Z75553-5|CAA99950.2|  533|Caenorhabditis elegans Hypothetical pr...    27   4.4  
U88310-3|AAB42337.1|  608|Caenorhabditis elegans Hypothetical pr...    27   7.7  
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr...    27   7.7  
AF078783-4|AAC26919.2|   87|Caenorhabditis elegans Hypothetical ...    27   7.7  

>Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical
           protein T05E11.1 protein.
          Length = 210

 Score =  168 bits (408), Expect = 2e-42
 Identities = 79/85 (92%), Positives = 83/85 (97%)
 Frame = +1

Query: 1   SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 180
           SLMMHGRNNGKKLM VRIVKHAFEII+LLTGENP+QVLV A+INSGPREDSTRIGRAGTV
Sbjct: 81  SLMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPVQVLVNAVINSGPREDSTRIGRAGTV 140

Query: 181 RRQAVDVSPLRRVNQAIWLLCTGAR 255
           RRQAVDV+PLRRVNQAIWLLCTGAR
Sbjct: 141 RRQAVDVAPLRRVNQAIWLLCTGAR 165



 Score = 93.1 bits (221), Expect = 8e-20
 Identities = 49/64 (76%), Positives = 53/64 (82%), Gaps = 3/64 (4%)
 Frame = +3

Query: 207 LAPSQPSNLAFVHRCT---EAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVA 377
           +AP +  N A    CT   EAAFRN+KTIAEC+ADELINAAKGSSNSYAIKKKDELERVA
Sbjct: 147 VAPLRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIKKKDELERVA 206

Query: 378 KSNR 389
           KSNR
Sbjct: 207 KSNR 210


>Z75553-5|CAA99950.2|  533|Caenorhabditis elegans Hypothetical
           protein ZC443.5 protein.
          Length = 533

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 155 LGSVVRVQFVVKPLMFHPCAESTKQSGFCAQVHGGCIQ 268
           LGS + + +  KP +  P      ++    + HGGC+Q
Sbjct: 378 LGSTMELAYQGKPALIIPLMADQPRNAHMLKRHGGCLQ 415


>U88310-3|AAB42337.1|  608|Caenorhabditis elegans Hypothetical
           protein C24G7.1 protein.
          Length = 608

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
 Frame = +3

Query: 249 CTEAAFRNIKTIAECVADE---LINAAKGSSNSYAIKKKDELERVAK-SNR*NILLSHLY 416
           CT A + N + + EC   E    +N   GS+N+   K + +L R A+ + + N L+   +
Sbjct: 380 CTPAVYNNERNLKECTPFETLACVNNHNGSNNATG-KLEFKLPRCAQCAQQCNNLIYRAF 438

Query: 417 NKQ 425
           N Q
Sbjct: 439 NSQ 441


>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical
           protein F45E4.4 protein.
          Length = 2361

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 144 TGSRVDNGSHEYLQRVFSS*QVNNFKRMFD 55
           TGSR  +GS  + Q  FS+  ++ FK  FD
Sbjct: 226 TGSRHSSGSSAHSQFGFSTPSISGFKIFFD 255


>AF078783-4|AAC26919.2|   87|Caenorhabditis elegans Hypothetical
           protein H10E21.1 protein.
          Length = 87

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +1

Query: 268 EILKQSQSVLQMN*LMQLRV--HLTPTPSKRRTSWS 369
           EI +Q  SV   N  +QL+V  HL    SKRRT+W+
Sbjct: 16  EISRQLNSVETTN-ALQLKVIMHLLNRVSKRRTTWT 50


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,996,551
Number of Sequences: 27780
Number of extensions: 191565
Number of successful extensions: 559
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)