Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0839
         (597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    27   0.16 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.28 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.64 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    24   1.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   4.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   6.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.0  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   7.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.9  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 258 LAKHTSEDNESYDRVISLEQKKRANKI 338
           LA+ + +D E YDRV++L +K    KI
Sbjct: 566 LAEASDKDPEMYDRVVALREKNPDLKI 592


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.28
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 190  WEHPHCW*QECTAG 149
            WE+P CW  +C  G
Sbjct: 1944 WEYPKCWQVDCNKG 1957



 Score = 25.8 bits (54), Expect = 0.28
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 190  WEHPHCW*QECTAG 149
            WE+P CW  +C  G
Sbjct: 2442 WEYPKCWQVDCNKG 2455



 Score = 25.4 bits (53), Expect = 0.37
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 190  WEHPHCW*QECTAG 149
            WE+P CW  +C  G
Sbjct: 1519 WEYPKCWQVDCKKG 1532



 Score = 22.6 bits (46), Expect = 2.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 28  LEATENKDYQRLRELTQKYSGNRPPTEPYNT 120
           L +T N+ + R  EL        PPT+PY T
Sbjct: 530 LLSTINR-HLRGNELLPMQQSQNPPTKPYGT 559



 Score = 22.6 bits (46), Expect = 2.6
 Identities = 6/14 (42%), Positives = 7/14 (50%)
 Frame = -3

Query: 190 WEHPHCW*QECTAG 149
           W +P CW   C  G
Sbjct: 756 WNYPVCWQSNCKKG 769


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 69  FSKSLIVFVFCSLQVFVLC 13
           F   +   V+CSL +FVLC
Sbjct: 406 FCTLVTALVYCSLAIFVLC 424



 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 329 CTLLLLQRYNSIVAFVVLARVF 264
           CT+L +QR+N+  +     RVF
Sbjct: 508 CTVLRVQRFNNYQSLAHYLRVF 529


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -1

Query: 465 LCNAKCPIHVAFPFDQLVVLWRVKL 391
           L + +CP+ +AF  ++    W+ K+
Sbjct: 69  LASVRCPVGLAFDIERQTCDWKTKV 93


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 14/56 (25%), Positives = 20/56 (35%)
 Frame = +1

Query: 97  PPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITDNHSLDSFWP 264
           PPT  Y  P       +D  C     +     Q +NA K   A + +   +  F P
Sbjct: 440 PPTYDYGIPQGVVLNPLDAICNKPRKDAVCVSQLRNAKKVDEAILEERPDVKIFLP 495


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = +1

Query: 76  QKYSGNRPPTEPYNTPATFDTPNIDRPCTPATN 174
           + Y     P+ PY  P +  +  +  PC  + N
Sbjct: 201 RNYGPEPVPSTPYPPPGSLGSMGVSVPCGTSGN 233


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/33 (24%), Positives = 13/33 (39%)
 Frame = +1

Query: 106 EPYNTPATFDTPNIDRPCTPATNNEDAPRQTKN 204
           EP       D   + RP  PA      P+++ +
Sbjct: 328 EPKRPRPNIDRHEVTRPAAPANRGNGFPKRSSD 360


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -2

Query: 263 GQKESKLWLSVISAVLSLVAFFVCLGASSLLVAGVHGRSMF 141
           G+KESKL  +     +     F+C     + V G   R+ F
Sbjct: 127 GKKESKLMKNFYFWFVLKQVMFLCYSTYGIQVFGTMQRTSF 167


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
 Frame = +3

Query: 312 EQKKRANKIA-SQLQAEITSATLADEA-LALPSIEQQADQTERPHELDTWR--YKARNYI 479
           +Q K  N I  S  Q+ I S ++       + S    A   ER   L T     + +  I
Sbjct: 14  QQNKMYNVIQHSPQQSIIVSGSITQPTKTVIQSKRPLAPAPERTSVLVTNNSDLRCKRKI 73

Query: 480 MYVPXGRSPRPAAEARTSPPE 542
            ++P G   +PA+ AR +  E
Sbjct: 74  QFMPYGPQQQPASVARRNARE 94


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -2

Query: 386 FICECCRRDLGLK 348
           F CE C R  G K
Sbjct: 135 FTCEVCNRSFGYK 147


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,518
Number of Sequences: 336
Number of extensions: 2966
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)