Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0839
(597 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0178 + 17594062-17595576 41 7e-04
01_01_0908 + 7158172-7158356,7159436-7159866,7159953-7161061,716... 34 0.099
07_01_0692 + 5240429-5240548,5241354-5241512 33 0.13
09_03_0042 + 11842263-11842698,11842799-11842896,11843082-118432... 31 0.53
03_05_1102 - 30413154-30414062,30414519-30415010 30 1.2
10_02_0113 + 5410413-5410471,5411330-5413309,5413535-5413594,541... 29 2.1
05_05_0270 - 23728986-23729267,23729575-23730120,23730207-237305... 29 2.1
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 29 2.1
03_06_0572 + 34812203-34812278,34812485-34813768,34813973-348140... 29 3.7
05_06_0015 + 24953918-24954359,24955622-24955857,24955945-249560... 28 4.9
04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,807... 28 4.9
11_04_0354 + 16697571-16700256,16700335-16700759 28 6.5
07_01_0248 - 1821340-1821996,1823619-1823761,1824239-1824453,182... 28 6.5
04_04_0350 + 24591002-24591123,24592020-24592091,24592343-245924... 28 6.5
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 28 6.5
02_01_0698 + 5216899-5217057,5217707-5218060 28 6.5
01_06_0486 - 29729333-29729356,29729856-29730106,29730364-297304... 28 6.5
01_04_0098 - 15989906-15989912,15990008-15990082,15990159-159902... 28 6.5
05_07_0219 - 28474661-28475146,28475979-28476644 27 8.6
02_03_0234 - 16696440-16696658,16696822-16696945,16698070-16698503 27 8.6
01_05_0760 - 24977608-24978708 27 8.6
>06_03_0178 + 17594062-17595576
Length = 504
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +3
Query: 255 FLAKHTSEDNESYDRVISLEQKKRANKIASQLQ-AEITSATLADEALALPSIEQQADQTE 431
F + TSEDNES+ R++ +R + A L+ E+ A ++A + +
Sbjct: 170 FFRRFTSEDNESFSRILEKVNHRRRERYAHLLEPGEVAKAPQLEDAKRDRITDGYGTSGQ 229
Query: 432 RPHELDTWRYKARNYIMYVPXGRSPRPAAE 521
L+ ++ A+N +MY P R P +
Sbjct: 230 PLSTLEGAKFTAKNLLMYYPADRGEAPLTD 259
>01_01_0908 +
7158172-7158356,7159436-7159866,7159953-7161061,
7161372-7162820
Length = 1057
Score = 33.9 bits (74), Expect = 0.099
Identities = 23/95 (24%), Positives = 46/95 (48%)
Frame = +1
Query: 1 EKLNAQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNE 180
+K+ +E + A + +D R E+ ++ + + + P + ++D P + T E
Sbjct: 369 KKVRLLSEIINANQVED-SRSDEVHRENAADPCEDDRSTIPVPMEV-SMDIPVSNHTVGE 426
Query: 181 DAPRQTKNATKDKTADITDNHSLDSFWPNTRARTT 285
D + +KN TK K +D+ D+ S W N + + T
Sbjct: 427 DGLKSSKNKTKRKYSDVVDDGSSLMNWLNGKKKRT 461
>07_01_0692 + 5240429-5240548,5241354-5241512
Length = 92
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -2
Query: 248 KLWLSVISAVLSLVAFFVCLGASSLLVAGVHGRSMFGVSKVAGVLYGSVG 99
K+ L +I +SL F CL + +L V GR+M + + GV+YG G
Sbjct: 36 KILLMIIVTGVSLGVFVTCLVLAFVLDLTVEGRAMVVFTALVGVVYGVAG 85
>09_03_0042 +
11842263-11842698,11842799-11842896,11843082-11843217,
11843349-11843509,11843603-11843753,11843855-11843952,
11844142-11844277,11844404-11844532,11844622-11844720,
11844814-11844909,11845002-11845100,11845201-11845296,
11846394-11846628,11846752-11846873,11846993-11847114,
11847275-11847345,11847940-11848027,11848374-11848439,
11848676-11848795
Length = 852
Score = 31.5 bits (68), Expect = 0.53
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Frame = +1
Query: 70 LTQKYSGNRPPTEPYNT---PATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITDN 240
L + SG+ PT + T P TFD+ +D TP ++ +A Q++ +T++ + + +
Sbjct: 639 LQSELSGSAHPTYDHQTVMRPTTFDSLELDMVDTPTSDVSNAKEQSQGSTRNHQTESSKD 698
Query: 241 H-----SLDSFWPNTRARTTKATIELYR--WSKRSV 327
+ S P+ + T LY W K +V
Sbjct: 699 SAPAMCTTSSDPPSGKGETADQVCILYNLSWKKTAV 734
>03_05_1102 - 30413154-30414062,30414519-30415010
Length = 466
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/70 (30%), Positives = 26/70 (37%)
Frame = +3
Query: 336 IASQLQAEITSATLADEALALPSIEQQADQTERPHELDTWRYKARNYIMYVPXGRSPRPA 515
I S ++T AL L D T L+ W R Y P SP A
Sbjct: 157 IWSPFYVQLTEFADKSYALGLSCTHLHNDPTAAVLFLNAWAAAHRRDSPYPPFLHSPALA 216
Query: 516 AEARTSPPEH 545
A++ PPEH
Sbjct: 217 AKSAAPPPEH 226
>10_02_0113 +
5410413-5410471,5411330-5413309,5413535-5413594,
5416037-5418047
Length = 1369
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 444 IHVAFPFDQLVVLWRVKLVLHLRVLQT*S--RLEAAMLFYLH 325
+HV P QLV+ W L+LHL +T S +E AML+ H
Sbjct: 87 LHVDDPRHQLVLFWTPLLLLHLGSQETISAFSIEDAMLWKRH 128
>05_05_0270 -
23728986-23729267,23729575-23730120,23730207-23730561,
23731147-23731442,23731665-23731714,23731802-23731904,
23732059-23732148,23732328-23732384,23732571-23732618,
23732725-23732753,23732940-23733087
Length = 667
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = -2
Query: 263 GQKESKLWLSVISAVLSLVAFFVCLGASSLLVAGVHGR--SMFGVSKVA-GVLYGSVGG 96
G + W SV +A +L F+ +G ++ G+H R SM+ + A V GS GG
Sbjct: 9 GAPAKRRWRSVAAAAAALALLFLSVGVPLAVLLGLHQRFPSMYLADESAVSVFGGSEGG 67
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = +1
Query: 121 PATFDTPNIDRPCTPATNNEDAP---RQTKNATKDKTADITDNHSLDSFWPNTRARTTKA 291
PA TP RP TP P RQT N+T D A T S + P+T ++A
Sbjct: 134 PARSSTPVKTRPSTPTKTRPSTPVRTRQTANSTSDSAAARTT--SAQNSRPSTPTSRSRA 191
>03_06_0572 +
34812203-34812278,34812485-34813768,34813973-34814049,
34814299-34814646
Length = 594
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 91 NRPPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITDN 240
N PP P TP T P TP N AP T T N
Sbjct: 292 NLPPLYPEPTPVTMPDPTTTTTPTPFMNPVTAPTMPSPVTNPATTPAVTN 341
>05_06_0015 +
24953918-24954359,24955622-24955857,24955945-24956085,
24956188-24956619,24956847-24956948
Length = 450
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 195 LSGSILIVGSRSARPVNVWRVKSGWGVIW 109
L +ILIVG S + W VK+ WG W
Sbjct: 284 LDHAILIVGYGSEGGKDYWIVKNSWGESW 312
>04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,
8078108-8078360,8078613-8078768,8078854-8079770,
8079858-8079927,8082310-8082416,8082722-8082755,
8083621-8083940,8084031-8084820,8084890-8085046,
8085647-8086068
Length = 1255
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +3
Query: 291 YDRVISLEQKKRANKIASQLQAEITSATLADEALALPSIEQQADQTER 434
+ R I + Q + +++LQ+ T+A+L+DE LAL + QQ + + R
Sbjct: 907 HHRSIHITQDTSNSSASAELQSTETTASLSDEQLAL-LLHQQLNSSPR 953
>11_04_0354 + 16697571-16700256,16700335-16700759
Length = 1036
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 240 VISNICGFVFSGIFCLSGSILIVGSRSARPVNV 142
V+SN+ GFVF+G L G I +G PV++
Sbjct: 606 VLSNMTGFVFNGNLGLCGGIPELGLPPCPPVSM 638
>07_01_0248 -
1821340-1821996,1823619-1823761,1824239-1824453,
1825911-1826049,1826152-1826385,1826504-1826624
Length = 502
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 242 WLSVISAVLSLVAFFVCLGASSLLVAG 162
WLS+++AV+SL + LG S +AG
Sbjct: 211 WLSIVAAVMSLAYSTIGLGLSIAKIAG 237
>04_04_0350 +
24591002-24591123,24592020-24592091,24592343-24592448,
24593138-24593242,24593693-24593815,24594163-24594630,
24595226-24595351,24595430-24595516,24595615-24595701,
24595807-24595903,24596519-24596636,24596923-24596995,
24597504-24597566,24597666-24597832,24598444-24598631,
24598909-24599057,24599193-24599442,24599597-24599855,
24599977-24600073,24606696-24606776,24606914-24606970,
24607264-24607395,24607476-24607562,24607941-24608049,
24608134-24608270,24608841-24608945,24609566-24609654,
24609757-24609859,24609960-24610064,24610282-24610293,
24611013-24611078
Length = 1279
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 270 TSEDNESYDRVIS--LEQKKRANKIASQLQAEITSATLADEALALPSIEQQADQTERPH 440
T ED YDRVIS ++++ K QL+ S +D + L SI + + + + H
Sbjct: 808 TPEDTYVYDRVISTIFDEERLIAKTQCQLEGSKKSTCKSDNSELLDSIIEVSKEVFKRH 866
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 354 AEITSATLADEALALP-SIEQQADQTERPHELDTWRYKARNYIMYVPXGRSPRPAAEART 530
+++T+ + +E L L EQ+++ H+L + R+ Y+ GR PRP + A +
Sbjct: 112 SKLTNLSSKNEVLDLYIDGEQESNSLNEKHKL---KLPVRSSSSYLGRGRPPRPHSTAPS 168
Query: 531 SPPEHK 548
SP K
Sbjct: 169 SPKSCK 174
>02_01_0698 + 5216899-5217057,5217707-5218060
Length = 170
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 408 EQQADQTE-RPHELDTWRYKARNYIMYVPXGRSPRPAAEARTSPPEHKAKSSTLRLR 575
E ++DQT+ +PH+ +Y Y S RPA R H S LRLR
Sbjct: 26 EAESDQTKSQPHKTKAQKYSEFPTHKYKVISISCRPATGRRGRRVRHVRLGSVLRLR 82
>01_06_0486 -
29729333-29729356,29729856-29730106,29730364-29730466,
29730571-29730663,29730773-29730905,29731184-29731272,
29731385-29731553,29731930-29732016,29732388-29732506,
29732554-29732706
Length = 406
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 477 IMYVPXGRSPRPAAEARTSPPEHKAKSS 560
++ +P R P PAA AR PP A+++
Sbjct: 2 LLRLPCARGPAPAAAARWRPPGRAARTA 29
>01_04_0098 -
15989906-15989912,15990008-15990082,15990159-15990238,
15990305-15990388,15998289-15998364,15999633-15999715,
16000294-16000412,16001208-16001254,16001483-16001541
Length = 209
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +3
Query: 498 RSPRPAAEARTSPP--EHKAKSSTLRLR 575
++P+PA+ SPP EHKAK++ LR
Sbjct: 138 KAPQPASSVELSPPDVEHKAKAAHQLLR 165
>05_07_0219 - 28474661-28475146,28475979-28476644
Length = 383
Score = 27.5 bits (58), Expect = 8.6
Identities = 25/96 (26%), Positives = 38/96 (39%)
Frame = +1
Query: 1 EKLNAQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNE 180
E++ + LE T + R + + + PP+ P P + TP+ P +PAT++
Sbjct: 45 EEITEELAQLEKTRMTTWAR--SVVESFDTAPPPSPP---PLSATTPHPPPP-SPATSSS 98
Query: 181 DAPRQTKNATKDKTADITDNHSLDSFWPNTRARTTK 288
T AT S WP R R TK
Sbjct: 99 RTATATATATPTSPTPTPPPTSATLLWP--RPRPTK 132
>02_03_0234 - 16696440-16696658,16696822-16696945,16698070-16698503
Length = 258
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -2
Query: 230 ISAVLSLVAFFVCLGA--SSLLVAGVHGRSMFGVSKVAGVLYGSVGG 96
++A L F +G SSL GVH S+F A V GS GG
Sbjct: 13 VAAAGVLAPAFAAVGVHGSSLATVGVHASSLFAAGDHADVDGGSGGG 59
>01_05_0760 - 24977608-24978708
Length = 366
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +1
Query: 97 PPTEPYN-TPATFDTPNIDRPCTPATNNEDA 186
PP PY TP T+ P +D P P A
Sbjct: 68 PPPSPYFCTPCTYQRPKLDAPGRPRRRRRSA 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,470,863
Number of Sequences: 37544
Number of extensions: 313761
Number of successful extensions: 1111
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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