Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0839
(597 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2341| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_32685| Best HMM Match : RCSD (HMM E-Value=0.18) 36 0.033
SB_34304| Best HMM Match : HR1 (HMM E-Value=3.2) 34 0.10
SB_32977| Best HMM Match : Gp-FAR-1 (HMM E-Value=2.5) 34 0.10
SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_53337| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 31 0.53
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 31 0.71
SB_2974| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 30 1.6
SB_37511| Best HMM Match : ABC_tran (HMM E-Value=0) 29 2.9
SB_20539| Best HMM Match : VWA (HMM E-Value=5.1848e-44) 29 2.9
SB_23660| Best HMM Match : AA_permease (HMM E-Value=1.3e-18) 29 2.9
SB_49474| Best HMM Match : DUF156 (HMM E-Value=5.2) 29 3.8
SB_35213| Best HMM Match : Gasdermin (HMM E-Value=4.3) 29 3.8
SB_58648| Best HMM Match : Helicase_C (HMM E-Value=2.2e-14) 29 3.8
SB_10514| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_2651| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_32459| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 28 5.0
SB_18969| Best HMM Match : F5_F8_type_C (HMM E-Value=8.4e-38) 28 5.0
SB_48635| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_37439| Best HMM Match : Guanylate_kin (HMM E-Value=2.3e-21) 28 6.6
SB_53641| Best HMM Match : rve (HMM E-Value=7.9e-14) 27 8.7
SB_51776| Best HMM Match : S-antigen (HMM E-Value=0.24) 27 8.7
SB_46438| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_4490| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_53071| Best HMM Match : TSP_1 (HMM E-Value=4.3e-05) 27 8.7
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 27 8.7
SB_32226| Best HMM Match : PID (HMM E-Value=3.9e-30) 27 8.7
SB_17601| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_4690| Best HMM Match : rve (HMM E-Value=1.5) 27 8.7
>SB_2341| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 731
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Frame = +3
Query: 255 FLAKHTSEDNESYDRVISLEQKKRANKIASQLQAEITSATLADEALALPSIE--QQADQT 428
FLAKHTSEDN S+++++ ++K K + E + + +LALPS + +Q
Sbjct: 350 FLAKHTSEDNASFEQIMETAREKHREKYEWLYKKEEEHSEIQQASLALPSGKEGEQLMIE 409
Query: 429 ERPHELDTWRYKARNYIMYVPXG 497
+RP ++TW YK +N +MYVP G
Sbjct: 410 QRPAMVETWTYKNKNALMYVPEG 432
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Frame = +1
Query: 4 KLNAQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNE- 180
KL AQ+EYL+A E D +RLRE++ +Y N+ P TPATFDTP+ + TP E
Sbjct: 265 KLRAQHEYLDAVEQNDTERLREISSRYQSNQTP--HLATPATFDTPSTIQG-TPLRQGEV 321
Query: 181 -DAPRQTKNATK--DKTADITDNHSLDSF 258
R+ N ++ DK N LD F
Sbjct: 322 SSMHREQPNQSQEGDKRTKDPSNLPLDKF 350
>SB_32685| Best HMM Match : RCSD (HMM E-Value=0.18)
Length = 530
Score = 35.5 bits (78), Expect = 0.033
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 37 TENKDYQRLRELTQKYSG---NRPPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKNA 207
T+N D E T + G + PT NT + T N D P + T+N D+P T N
Sbjct: 404 TDNTDSPTGTENTDSHIGKDNSDSPTGTDNTDSPTGTDNTDSPTS--TDNTDSPSGTDNT 461
Query: 208 TKDKTADITDNHS 246
D TD+H+
Sbjct: 462 DSPSGTDNTDSHT 474
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +1
Query: 100 PTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITDN 240
PT NT + T N D P T+N D+P T N D TD+
Sbjct: 437 PTGTDNTDSPTSTDNTDSPS--GTDNTDSPSGTDNTDSHTGTDDTDS 481
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Frame = +1
Query: 7 LNAQNEYLEATENKDYQRLRELTQKYSGNR---PPTEPYNTPATFDTPNIDRPCTPATNN 177
+ + + T+N D + T +G PT NT + T + D P T+N
Sbjct: 277 VGCETDIEHGTDNTDSPTGTDNTDSPTGTENTDSPTSTDNTDSPTGTDDTDSPT--GTDN 334
Query: 178 EDAPRQTKNATKDKTADITDN 240
D+P T N D TD+
Sbjct: 335 TDSPTGTDNTDSPTGTDNTDS 355
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 100 PTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITDNHS 246
PT NT + T + D P T+N D+P T N D TD+ S
Sbjct: 347 PTGTDNTDSPTGTDDTDSPT--GTDNTDSPTGTDNTDSPTGTDNTDSPS 393
>SB_34304| Best HMM Match : HR1 (HMM E-Value=3.2)
Length = 245
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 52 YQRLRELTQKYSGNRPPTEPYNTPATFDTPNI 147
YQR+++L Q SGN P++P NT +D P +
Sbjct: 77 YQRIQDLEQA-SGNEDPSKPLNTQIIYDLPQV 107
>SB_32977| Best HMM Match : Gp-FAR-1 (HMM E-Value=2.5)
Length = 402
Score = 33.9 bits (74), Expect = 0.10
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 97 PPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITDNHSLD---SFWPN 267
P T+ +TP T T + CTP T + P TKD++ T H+ D S P+
Sbjct: 319 PHTKDRSTPCTPHTKDRSTSCTPHTKDRSTP--CTPHTKDRSTSCTP-HTKDKSTSCTPH 375
Query: 268 TRARTTKATI 297
T+ R+T T+
Sbjct: 376 TKDRSTSCTL 385
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 97 PPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITDNHSLD---SFWPN 267
P T+ + P T T + PCTP T +D TKD++ T H+ D S P+
Sbjct: 308 PHTKDRSIPCTPHTKDRSTPCTPHT--KDRSTSCTPHTKDRSTPCTP-HTKDRSTSCTPH 364
Query: 268 TRARTTKAT 294
T+ ++T T
Sbjct: 365 TKDKSTSCT 373
>SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 33.1 bits (72), Expect = 0.18
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Frame = +1
Query: 16 QNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTPAT--FDTPNIDRPCTPATNN---E 180
+N +ATEN + + K + N TE Y+T AT + T + + T AT N +
Sbjct: 137 ENYSTKATENYSTKATENYSTKATENYKATENYSTKATENYSTKSKENNSTKATENYSTK 196
Query: 181 DAPRQTKNATKDKTADITDNHSLDSFWP-NTRARTTKATIELYRWSKRSVQ 330
+ + AT++ + T+N+S + +T+A +T ++S ++ +
Sbjct: 197 ATEKYSTKATENFSTKATENYSTKATEKYSTKASENYSTKATEKYSTKAAE 247
>SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 274
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +1
Query: 1 EKLNAQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTP-ATFDTPNID----RPCTP 165
+ +NAQ++ +T + K G +PP +P + P +T D P++ +P P
Sbjct: 144 QMVNAQSQASSSTSTQTNSSTESSAAKTKGEKPPAKPKDAPKSTSDWPSLTSPAIQPVAP 203
Query: 166 ATNNEDAPRQTKNATKDKTADI 231
AT + + +K+ T+ +
Sbjct: 204 ATPSTTTTAPSTADSKETTSPL 225
>SB_53337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 31.9 bits (69), Expect = 0.40
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +1
Query: 7 LNAQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNEDA 186
L ++ T DY+ + E +GN+PPTEP T DT ++ TP ++ +
Sbjct: 537 LTRNRRHIRPTATDDYEPVAEPAP--NGNQPPTEP-RTSTPGDTKHLCLDYTPPSDVDSL 593
Query: 187 PRQTKNATK 213
N TK
Sbjct: 594 NGTNDNKTK 602
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 31.5 bits (68), Expect = 0.53
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +1
Query: 103 TEPYNTPATFDTPNIDRPCTPATNNEDAPRQT----KNATKDKTADITDNHSLDSFWPNT 270
T P + P T TP + TP T A QT + D T + S S T
Sbjct: 393 TAPISDPMTTTTPTTTKATTPTTTKATASTQTAAEANTFLSTQKTDATTSQS-TSTTEAT 451
Query: 271 RARTTKATIEL 303
+++TTKAT L
Sbjct: 452 KSQTTKATTTL 462
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +1
Query: 7 LNAQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNEDA 186
L ++++L ++ +K + + +Q + PP P NTP F + P P T+
Sbjct: 253 LGLRDKHLASSSSKGHPPIPSASQNATPPPPPPPPSNTPGMFASSGFQPPPPPPTDFAPP 312
Query: 187 P 189
P
Sbjct: 313 P 313
>SB_2974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 30.7 bits (66), Expect = 0.93
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 88 GNRPPTEPYNTPATFDTPNIDRPCTPATNNEDAP 189
G P E N D ++ PCTP NNEDAP
Sbjct: 105 GKLPSDEDTNGETEDDEDDV-LPCTPENNNEDAP 137
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/90 (21%), Positives = 38/90 (42%)
Frame = +1
Query: 64 RELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITDNH 243
++ T+ + N+ ++P T A T P TNN P T + + T+N+
Sbjct: 3089 KKSTRPTTDNKQQSQPQTTTAEPITKTTSTTAKPTTNNNSKP-----TTNNNSKPTTNNN 3143
Query: 244 SLDSFWPNTRARTTKATIELYRWSKRSVQI 333
S + N++ T + L +K+ ++
Sbjct: 3144 SKPTTNNNSKPTTNNKKVNLNNTNKKDSEL 3173
>SB_37511| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 884
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -2
Query: 278 LARVFGQKESKLWLS--VISAVLSLVAFFVCLGASSLLVAGVHGRSMFGVSKVAGVLYG 108
L R+ G ++ WLS + A++ L+A + + S ++AG G S + V + LYG
Sbjct: 288 LMRIMGMVDTAYWLSWFLTYAIVVLIACLIMVTVS--VIAGFFGESNYLVLLIVFYLYG 344
>SB_20539| Best HMM Match : VWA (HMM E-Value=5.1848e-44)
Length = 262
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = +3
Query: 312 EQKKRANKIASQLQAEITSATLADEALALPSIEQQADQTERPHELDTWRYKARNYIMYVP 491
E ++AN IA L E T AT+ + + QT+RP L + R + P
Sbjct: 176 ELVRKANSIAI-LSCERTQATIPPPRF---TSRPRLPQTQRPPTLPPLTFPPRTF---AP 228
Query: 492 XGRSPRPAAEARTSPP 539
+ PRP R PP
Sbjct: 229 LTQPPRPVTRRRDVPP 244
>SB_23660| Best HMM Match : AA_permease (HMM E-Value=1.3e-18)
Length = 573
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -2
Query: 263 GQKESKLWLSVISAV-LSLVAFFVCLGASSLLVAGVHGRSMFGVSKVAGVLYGS 105
G K S ++ V++ + L +VAF +C+G L G F V+G+L G+
Sbjct: 179 GAKHSAVFNKVVTGINLIVVAFVICVGLFHLDTKNWSGPGQFVPYGVSGILAGA 232
>SB_49474| Best HMM Match : DUF156 (HMM E-Value=5.2)
Length = 660
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 426 TERPHELDTWRYKARNYIMYVPXGRSPRPAAEA 524
++ P D WR + R ++ P G S PAA A
Sbjct: 460 SQGPRPTDFWRERKRRFVRPSPRGHSGAPAAPA 492
>SB_35213| Best HMM Match : Gasdermin (HMM E-Value=4.3)
Length = 442
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +1
Query: 115 NTPATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITDNHSLDSFWPNTRA-----R 279
NT AT +T N + +NN A +T N T+ + D + NT+A
Sbjct: 190 NTQATLETSNNTQATLETSNNTQATLETSNNTQATLENNNDTQATLETSNNTQATLETSN 249
Query: 280 TTKATIE 300
T+AT+E
Sbjct: 250 NTQATLE 256
>SB_58648| Best HMM Match : Helicase_C (HMM E-Value=2.2e-14)
Length = 679
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +1
Query: 1 EKLNAQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNE 180
EKL+ N AT+ DY+ + E +GN+PPTEP + TP TP +
Sbjct: 269 EKLSLNNT--SATD--DYEPVAEPAP--NGNQPPTEPRTS-----TPGTPAKSTPTQSGP 317
Query: 181 DAPRQTKNATK 213
R T+ K
Sbjct: 318 PLRRSTRTVNK 328
>SB_10514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 20 TNTWRLQKTKTIRDFEN 70
T TW L KT+TI FEN
Sbjct: 111 TKTWSLSKTETITSFEN 127
>SB_2651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +1
Query: 91 NRPPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITDNHSLDSFW 261
++P ++P TP P ++ TPA N ++ P K D+ ++ D FW
Sbjct: 230 HKPQSKPKKTPHKPKPPKKEQGITPADNLQEQP---KGPPSKLPPDVPVDNDDDDFW 283
>SB_32459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2011
Score = 28.3 bits (60), Expect = 5.0
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 85 SGNRPPTEPYN-TPATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITDNHSLDSFW 261
SG PT+P N P+T D D T +T P+ T+ AT T +D+ D +
Sbjct: 215 SGVNFPTQPVNPDPSTRDP---DTSPTSSTRTSSTPQPTR-ATGTPTRPTSDS-LFDPNY 269
Query: 262 PNTRARTTKATIELYRWS 315
T TK+ ++ RW+
Sbjct: 270 HVTVPLATKSIFQIKRWA 287
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +3
Query: 261 AKHTSEDNESYDRVISLEQKKRA-NKIASQLQAEITSAT--LADEALALPSIEQQADQTE 431
AK E + DR S E + A K QL+ ++ +A LAD L E+QAD++E
Sbjct: 23 AKAEDELKNANDRADSAETEVAALTKQLQQLEDDLDAAESKLADTQGQLTEAEKQADESE 82
Query: 432 RPHEL 446
R ++
Sbjct: 83 RARKV 87
>SB_18969| Best HMM Match : F5_F8_type_C (HMM E-Value=8.4e-38)
Length = 488
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 302 NSIVAFVVLARVFGQKESKLWLSVISAVLSLVAFFVCL 189
N I+ ++ RVF ++ L + +L L+A F+CL
Sbjct: 161 NFIIPLTIVLRVFVLRKKPTILKFVCGMLVLLALFICL 198
>SB_48635| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +1
Query: 31 EATENKDYQRLRELTQKYSGNR---PPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTK 201
E + + +R ++ + G+R PP +P P+ ++ P P T ++AP +
Sbjct: 303 EKKSDPEIERPKKAAGRGKGSRRSSPPRQPLKRPSRASQEKVEEPAAPGT--DEAPAAGE 360
Query: 202 NATKDKTAD 228
K + A+
Sbjct: 361 EEAKAEAAE 369
>SB_37439| Best HMM Match : Guanylate_kin (HMM E-Value=2.3e-21)
Length = 609
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
Frame = +1
Query: 43 NKDYQRLRELTQKYSGNRPP----TEPYNTPAT-FDT 138
N+ Y+RL+ L +Y G PP T+ Y+T T FDT
Sbjct: 493 NEAYRRLKHLIMEYLGMSPPTTTDTDMYSTSDTSFDT 529
>SB_53641| Best HMM Match : rve (HMM E-Value=7.9e-14)
Length = 691
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/77 (29%), Positives = 33/77 (42%)
Frame = +1
Query: 1 EKLNAQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNE 180
EKL+ N AT+ DY+ + E +GN+PPTEP + TP TP +
Sbjct: 626 EKLSLNNT--SATD--DYEPVAEPAP--NGNQPPTEPRTS-----TPGTPAKSTPTQSGP 674
Query: 181 DAPRQTKNATKDKTADI 231
R T+ D+
Sbjct: 675 PLRRSTRTVKPPDRLDL 691
>SB_51776| Best HMM Match : S-antigen (HMM E-Value=0.24)
Length = 1669
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 169 TNNEDAPRQTKNATKDKTADITDNHSLDS 255
TN + + T+N D A+++DN +L+S
Sbjct: 587 TNTQQKRKSTRNTKVDNRAEVSDNSALNS 615
>SB_46438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 195 LSGSILIVGSRSARPVNVWRVKSGWGVIW 109
L +IL+VG + + W VK+ WG W
Sbjct: 8 LDHAILVVGYGNNNGQDYWLVKNSWGTGW 36
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/68 (30%), Positives = 24/68 (35%)
Frame = +1
Query: 91 NRPPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITDNHSLDSFWPNT 270
N T P NT T T P T T + T NAT T + + PNT
Sbjct: 161 NTTTTTP-NTTTTTPTATTTTP-TATTTTPNTTTNTPNATTTTPTATTTTPNATTTTPNT 218
Query: 271 RARTTKAT 294
T AT
Sbjct: 219 TTTTPNAT 226
>SB_4490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +1
Query: 25 YLEATENKDYQRLRELTQKYSGNRPP-TEPYNTPATFDTPNIDRPCTPATN-NEDAPRQT 198
+++ TEN+D R +K T+ PN D + +EDAP+QT
Sbjct: 55 FIDDTENEDDARTSSQGKKVKRRAQAFTDSDEEEDDKQEPNPDAFMDDTEDEDEDAPQQT 114
Query: 199 KNATKDKTADITD 237
AT D A + D
Sbjct: 115 NAATDDDDAAVND 127
>SB_53071| Best HMM Match : TSP_1 (HMM E-Value=4.3e-05)
Length = 755
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = +1
Query: 97 PPTEPYNT-----PATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITDNHSLDS 255
PP P N P T + N D PCTP E A T N+ AD+T+N L++
Sbjct: 322 PPILPENCDHAIKPPTSEPCNSDNPCTPNEEIEIACFVT-NSDIAVLADLTENLDLNN 378
>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
Length = 642
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +1
Query: 139 PNIDRPCTPATNNEDAPRQTKNAT----KDKTADITDNHSLD 252
PN D C P T N PR T + K+K A TD+ SLD
Sbjct: 524 PNNDA-CLPGTRNSKLPRSTHTWSAGIFKNKMATRTDSISLD 564
>SB_32226| Best HMM Match : PID (HMM E-Value=3.9e-30)
Length = 591
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 270 TSEDNESYDRVISLEQKKRANKIASQLQAEITSATLADEALALPSIEQQADQTERPHELD 449
TSE E Y+ +S Q R S++ + +L+L S ++ ++ RP +
Sbjct: 49 TSETIEPYNS-LSNSQPSRLRVAESRILPSLVGMKRLKRSLSLRSSRRRIPESHRPQVWE 107
Query: 450 TWRYKARN 473
YK RN
Sbjct: 108 NDSYKVRN 115
>SB_17601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 649
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = -1
Query: 243 VVISNICGFVFSGIFCLSGSILIVGSRSARPVNVWRVKSGWGVIWFCRWSVPAILLS*F 67
V++++ G S C GS+++VG +R V W+V + W V + F
Sbjct: 240 VLLASNLGIPISTTHCKVGSVVMVGRARSREVVDWKVFRNVVLAWVVTMPVAGLFFRPF 298
>SB_4690| Best HMM Match : rve (HMM E-Value=1.5)
Length = 282
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/77 (29%), Positives = 33/77 (42%)
Frame = +1
Query: 1 EKLNAQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNE 180
EKL+ N AT+ DY+ + E +GN+PPTEP + TP TP +
Sbjct: 217 EKLSLNNT--SATD--DYEPVAEPAP--NGNQPPTEPRTS-----TPGTPAKSTPTQSGP 265
Query: 181 DAPRQTKNATKDKTADI 231
R T+ D+
Sbjct: 266 PLRRSTRTVKPPDRLDL 282
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,073,646
Number of Sequences: 59808
Number of extensions: 382611
Number of successful extensions: 1479
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1469
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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