Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0839
(597 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 24 0.98
DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein. 23 2.3
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 2.3
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 2.3
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 3.0
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 3.0
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 4.0
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 4.0
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 22 4.0
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 5.3
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 22 5.3
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 21 9.2
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 21 9.2
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 24.2 bits (50), Expect = 0.98
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 351 QAEITSATLADEALALPSIEQQADQTER 434
Q ++S E L + + QQADQT+R
Sbjct: 97 QRSLSSFLKTAEVLRVSGLTQQADQTDR 124
>DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein.
Length = 143
Score = 23.0 bits (47), Expect = 2.3
Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -2
Query: 350 KLRCYFICTL---LLLQRYNSIVAFVVLARVFGQKESKLWLSVISA 222
KL+CYF C L ++ + N + + +L +V + ++ + +I +
Sbjct: 67 KLKCYFNCVLEKFNVMDKKNGKIRYNLLKKVIPEAFKEIGVEMIDS 112
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.0 bits (47), Expect = 2.3
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +1
Query: 46 KDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTA 225
++ + LR+L + Y P P ++ + +++ T +E Q + T D T+
Sbjct: 165 QNLEELRDLKETY-----PFNPVLFISSLENISLNGIDPELTESEQHRLQNRLYTNDSTS 219
Query: 226 DITDNHSLD 252
TD+ S+D
Sbjct: 220 SKTDDDSID 228
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.0 bits (47), Expect = 2.3
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +1
Query: 46 KDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTA 225
++ + LR+L + Y P P ++ + +++ T +E Q + T D T+
Sbjct: 203 QNLEELRDLKETY-----PFNPVLFISSLENISLNGIDPELTESEQHRLQNRLYTNDSTS 257
Query: 226 DITDNHSLD 252
TD+ S+D
Sbjct: 258 SKTDDDSID 266
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 22.6 bits (46), Expect = 3.0
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -1
Query: 228 ICGFVFSGIFCLSGSILIVG 169
+C FV +F +SG +++VG
Sbjct: 177 LCVFVAGVVFIVSGLLMLVG 196
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 541 SGGLVRASAAGLGLRPXGTYIM 476
+GG+ +AAG+ +P GT I+
Sbjct: 279 AGGVAIGTAAGMMCQPVGTLIV 300
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/34 (26%), Positives = 14/34 (41%)
Frame = -1
Query: 195 LSGSILIVGSRSARPVNVWRVKSGWGVIWFCRWS 94
LSG L + R + +W GW + W+
Sbjct: 158 LSGKPLSINGALIRIIAIWLFSLGWTIAPMFGWN 191
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 456 RYKARNYIMYVPXGRSPRPAAEARTSPPE 542
RY ++ +Y+P + P E R +PP+
Sbjct: 227 RYVSQWEEVYIPLYQQPERHYERRATPPQ 255
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/34 (26%), Positives = 14/34 (41%)
Frame = -1
Query: 195 LSGSILIVGSRSARPVNVWRVKSGWGVIWFCRWS 94
LSG L + R + +W GW + W+
Sbjct: 34 LSGKPLSINGALIRIIAIWLFSLGWTIAPMFGWN 67
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = +1
Query: 61 LRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPAT 171
L L Y N+ PT TP T + R P +
Sbjct: 41 LENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVS 77
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -2
Query: 239 LSVISAVLSLVAFFVCLGA 183
L V+ +++ +++FF C GA
Sbjct: 55 LIVLGSIIFVISFFGCCGA 73
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +3
Query: 435 PHELDTWRYKARNYIMYVPXGRSPRPAAEAR 527
P D +R+ + Y+P G PR AR
Sbjct: 418 PERFDQDAMASRHPMHYLPFGDGPRNCIGAR 448
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = -1
Query: 195 LSGSILIVGSRSARPVNVWRVKSGWGV 115
LSG L + R + +W GW +
Sbjct: 124 LSGKPLSINGALIRIIAIWLFSLGWTI 150
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,834
Number of Sequences: 438
Number of extensions: 3281
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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