Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0839
(597 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g07790.1 68416.m00951 DGCR14-related similar to DGCR14 protei... 54 1e-07
At3g09370.1 68416.m01111 myb family transcription factor (MYB3R3... 32 0.25
At3g26050.1 68416.m03244 expressed protein 31 0.44
At1g09850.1 68414.m01109 cysteine protease, papain-like (XBCP3) ... 31 0.44
At1g29110.1 68414.m03563 cysteine proteinase, putative contains ... 30 1.0
At1g21510.1 68414.m02690 hypothetical protein 30 1.0
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 30 1.3
At3g24715.1 68416.m03103 octicosapeptide/Phox/Bem1p (PB1) domain... 29 1.8
At1g77860.1 68414.m09074 rhomboid family protein contains PFAM d... 29 2.4
At5g37380.2 68418.m04492 DNAJ heat shock N-terminal domain-conta... 28 4.1
At5g37380.1 68418.m04491 DNAJ heat shock N-terminal domain-conta... 28 4.1
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 28 4.1
At2g40116.1 68415.m04933 phosphoinositide-specific phospholipase... 28 4.1
At5g51630.2 68418.m06402 disease resistance protein (TIR-NBS-LRR... 28 5.4
At5g51630.1 68418.m06401 disease resistance protein (TIR-NBS-LRR... 28 5.4
At3g14180.1 68416.m01792 expressed protein similar to 6b-interac... 28 5.4
At4g16950.2 68417.m02557 disease resistance protein (TIR-NBS-LRR... 27 7.2
At4g16950.1 68417.m02556 disease resistance protein (TIR-NBS-LRR... 27 7.2
At5g56660.1 68418.m07073 IAA-amino acid hydrolase 2 (ILL2) ident... 27 9.5
At4g23520.1 68417.m03390 cysteine proteinase, putative contains ... 27 9.5
At2g46020.2 68415.m05725 transcription regulatory protein SNF2, ... 27 9.5
At2g46020.1 68415.m05724 transcription regulatory protein SNF2, ... 27 9.5
At2g41180.1 68415.m05086 sigA-binding protein-related low simila... 27 9.5
At2g35600.1 68415.m06030 expressed protein 27 9.5
>At3g07790.1 68416.m00951 DGCR14-related similar to DGCR14 protein
(DiGeorge syndrome critical region 14) (ES2 protein)
(Swiss-Prot:Q96DF8) [Homo sapiens]
Length = 508
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/90 (27%), Positives = 42/90 (46%)
Frame = +3
Query: 255 FLAKHTSEDNESYDRVISLEQKKRANKIASQLQAEITSATLADEALALPSIEQQADQTER 434
F ++TSEDNES+ +++ +K+ K L+ E ++ + +
Sbjct: 171 FFRRYTSEDNESFSKILEKVNRKKKEKYGFLLEGEKEDGKSIEDVKRDRITDGYGTSDQP 230
Query: 435 PHELDTWRYKARNYIMYVPXGRSPRPAAEA 524
P L+ W+Y A+N +MY P R P EA
Sbjct: 231 PSTLEGWKYTAKNLLMYHPADRGEAPLTEA 260
>At3g09370.1 68416.m01111 myb family transcription factor (MYB3R3)
contains Pfam profile: Myb DNA-binding proteins;
identical to cDNA putative c-myb-like transcription
factor (MYB3R3) GI:15375285
Length = 505
Score = 32.3 bits (70), Expect = 0.25
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 13 AQNEY-LEATENKDYQRLREL-TQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNEDA 186
A N Y L T DY R E+ TQ+ GN P +P +F TP PC +N
Sbjct: 330 ANNGYHLYYTPQIDYYRASEVDTQRMYGNECGCSPSASPVSFFTP---PPCRNVHSNGST 386
Query: 187 PRQTKNATKD 216
PR ++ ++
Sbjct: 387 PRSPESYLRE 396
>At3g26050.1 68416.m03244 expressed protein
Length = 533
Score = 31.5 bits (68), Expect = 0.44
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 118 TPATFDTPNIDRPCTPATNNEDAPRQTKN-ATKDKTAD----ITDNHSLDSFWPNTRART 282
TP T +P R TP N P QT + A+ K + + + H P+++ +T
Sbjct: 459 TPMTLTSPRFRRNQTPGKENIKKPHQTPHKASSMKIINTKKVVMEKHKSSKIHPSSKQQT 518
Query: 283 TKATIE 300
TK T E
Sbjct: 519 TKRTQE 524
>At1g09850.1 68414.m01109 cysteine protease, papain-like (XBCP3)
identical to papain-like cysteine peptidase XBCP3
GI:14600257 from [Arabidopsis thaliana]; contains Pfam
profiles PF00112: Papain family cysteine protease and
PF00396: Granulin
Length = 437
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -1
Query: 216 VFSG--IFCLSGSILIVGSRSARPVNVWRVKSGWGVIW 109
+FSG L ++LIVG S V+ W VK+ WG W
Sbjct: 267 IFSGPCSTSLDHAVLIVGYGSQNGVDYWIVKNSWGKSW 304
>At1g29110.1 68414.m03563 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 334
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = -1
Query: 222 GFVFSGIFC---LSGSILIVGSRSARPVNVWRVKSGWGVIW 109
G V++G+ C ++ ++ IVG + +N W +K+ WG W
Sbjct: 264 GGVYAGLDCGTDVNHAVTIVGYGTMSGLNYWVLKNSWGESW 304
>At1g21510.1 68414.m02690 hypothetical protein
Length = 323
Score = 30.3 bits (65), Expect = 1.0
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Frame = +1
Query: 19 NEYLEAT--ENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNID--RPCTPATNNEDA 186
N++L A EN R+ L + S + T+P P+ FD+P I TP NED+
Sbjct: 116 NDFLRACYQENSHVARINSLREA-SLSMKTTKP-RYPSRFDSPVIPSRNSTTPNRANEDS 173
Query: 187 PRQTKNATKDKTADITDNH 243
R + N +K +T +++ NH
Sbjct: 174 KRGS-NCSK-RTRELSPNH 190
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 29.9 bits (64), Expect = 1.3
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = +1
Query: 1 EKLNAQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRP---CTPAT 171
E+LN + L A + Q+L +++ YS + +E T A D I R
Sbjct: 342 EELNTRITTLVAEKESYIQKLDSISKDYSALKLTSE---TQAAADAELISRKEQEIQQLN 398
Query: 172 NNEDAPRQTKNATKDKTADITDNH 243
N D N +KDK AD+T+ +
Sbjct: 399 ENLDRALDDVNKSKDKVADLTEKY 422
>At3g24715.1 68416.m03103 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile
PF00564: PB1 domain
Length = 756
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +1
Query: 166 ATNNEDAPRQTKNATKDKTADITDNHSLDSFWPNTRARTTKATIELYRWSKRSVQIK*HR 345
+TN+ D+ ++ D T +IT HS S++ R ++ +T+ + + Q++ HR
Sbjct: 491 STNSNDSCLGIPHSYSDSTLEITGGHS--SYFSQERQQSPSSTLNFTKKQTQEKQVQVHR 548
Query: 346 S 348
+
Sbjct: 549 N 549
>At1g77860.1 68414.m09074 rhomboid family protein contains PFAM
domain PF01694, Rhomboid family
Length = 319
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -2
Query: 248 KLWLSVISAVLSLVAFFVCLGASSLLVAGVHGRSMFGVSKVAGV--LYGSVGGLFPLYF* 75
++W + S L F + + SL+ G++ FG ++A + L G +G LF + F
Sbjct: 121 EIWRILTSPWLHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVIYFLSGIMGSLFAVLFV 180
Query: 74 VNSRSL 57
N S+
Sbjct: 181 RNIPSI 186
>At5g37380.2 68418.m04492 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Frame = +1
Query: 91 NRPPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKN-----ATKDKTADITDNHS 246
N PP + N PA P + PA N + P Q N T KT TDNH+
Sbjct: 167 NNPPAQKTNPPAQKTNPPAQKTNPPAQKN-NPPTQKNNPQKPVGTTQKTGR-TDNHT 221
>At5g37380.1 68418.m04491 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Frame = +1
Query: 91 NRPPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKN-----ATKDKTADITDNHS 246
N PP + N PA P + PA N + P Q N T KT TDNH+
Sbjct: 167 NNPPAQKTNPPAQKTNPPAQKTNPPAQKN-NPPTQKNNPQKPVGTTQKTGR-TDNHT 221
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 726
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 31 EATENKDYQRLRELTQKYSGN 93
E TEN D+Q L ++T YSG+
Sbjct: 599 EKTENLDFQELAQMTDGYSGS 619
>At2g40116.1 68415.m04933 phosphoinositide-specific phospholipase C
family protein contains Pfam profile: PF00388
phosphatidylinositol-specific phospholipase C
Length = 613
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +3
Query: 264 KHTSEDNE-SYDRVISLEQKKRANKIASQLQAEITSATLADEALALPSIEQQADQTERPH 440
+ SED + +Y R+I++ K + +++ + D+ L EQ+ D+T +
Sbjct: 338 EEASEDQKPAYKRLITIHAGKPKGTVKEEMKVVV------DKVRRLSLSEQELDRTCSSN 391
Query: 441 ELDTWRYKARNYIMYVPXG 497
D R+ RN + P G
Sbjct: 392 SQDVVRFTQRNLLRIYPKG 410
>At5g51630.2 68418.m06402 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1175
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -2
Query: 230 ISAVLSLVAFFVCLGASSLLVAGVHGRSMFGVSKVAGVLYGSVGGLF 90
I A L V +CL + + G+ G S G + +A +LY + F
Sbjct: 124 IEAHLKAVKSILCLESEEARMVGILGPSGIGKTTIARILYSKLSSQF 170
>At5g51630.1 68418.m06401 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1229
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -2
Query: 230 ISAVLSLVAFFVCLGASSLLVAGVHGRSMFGVSKVAGVLYGSVGGLF 90
I A L V +CL + + G+ G S G + +A +LY + F
Sbjct: 188 IEAHLKAVKSILCLESEEARMVGILGPSGIGKTTIARILYSKLSSQF 234
>At3g14180.1 68416.m01792 expressed protein similar to
6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum]
GI:18149189
Length = 443
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 372 TLADEALALPSIEQQADQTERPHELDTWRYKARN 473
TL + LP +QQ +R E WR++ RN
Sbjct: 271 TLPQQGRTLPQQQQQGMMVKRCSESKRWRFRKRN 304
>At4g16950.2 68417.m02557 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.; closest
homolog in Col-0 to RPP5 of clutivar Landsberg erecta.
Length = 1404
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = -2
Query: 230 ISAVLSLVAFFVCLGASSLLVAGVHGRSMFGVSKVAGVLYGSVGGLFPL 84
I A + + +CL + + G+ G+S G S + L+ + FPL
Sbjct: 191 IEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLSIQFPL 239
>At4g16950.1 68417.m02556 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.; closest
homolog in Col-0 to RPP5 of clutivar Landsberg erecta.
Length = 1449
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = -2
Query: 230 ISAVLSLVAFFVCLGASSLLVAGVHGRSMFGVSKVAGVLYGSVGGLFPL 84
I A + + +CL + + G+ G+S G S + L+ + FPL
Sbjct: 191 IEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLSIQFPL 239
>At5g56660.1 68418.m07073 IAA-amino acid hydrolase 2 (ILL2)
identical to IAA-amino acid hydrolase homolog 2
precursor [Arabidopsis thaliana] SWISS-PROT:P54970
Length = 439
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 136 TPNIDRPCTPATNNEDAPRQTKNATKD 216
TPN P P NN+D +Q K +D
Sbjct: 325 TPNGREPMPPTVNNKDLYKQFKKVVRD 351
>At4g23520.1 68417.m03390 cysteine proteinase, putative contains
similarity to cysteine proteinase (thiol protease) RD21A
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 356
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 195 LSGSILIVGSRSARPVNVWRVKSGWGVIW 109
L +++IVG S + W V++ WG W
Sbjct: 292 LDHALVIVGYGSENGQDYWIVRNSWGTTW 320
>At2g46020.2 68415.m05725 transcription regulatory protein SNF2,
putative similar to SP|P22082 Transcription regulatory
protein SNF2 (SWI/SNF complex component SNF2)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 2193
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 4 KLNAQNEYLEATENKDYQRLRELTQKYSGNRP--PTEPYNTPATFDTPNID 150
K + +N+ +EA +N D +R RE+ + N P E Y ++F T D
Sbjct: 837 KDDGRNKRMEALKNNDVERYREMLLEQQTNMPGDAAERYAVLSSFLTQTED 887
>At2g46020.1 68415.m05724 transcription regulatory protein SNF2,
putative similar to SP|P22082 Transcription regulatory
protein SNF2 (SWI/SNF complex component SNF2)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 2192
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 4 KLNAQNEYLEATENKDYQRLRELTQKYSGNRP--PTEPYNTPATFDTPNID 150
K + +N+ +EA +N D +R RE+ + N P E Y ++F T D
Sbjct: 837 KDDGRNKRMEALKNNDVERYREMLLEQQTNMPGDAAERYAVLSSFLTQTED 887
>At2g41180.1 68415.m05086 sigA-binding protein-related low
similarity to SigA binding protein [Arabidopsis
thaliana] GI:6980074; contains Pfam domain PF05678: VQ
motif
Length = 141
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 58 RLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNE 180
+ REL Q+ +G P +P TF ++ RPC N E
Sbjct: 54 KFRELVQELTGQDAADLP-PSPTTFTAVDLHRPCESEMNLE 93
>At2g35600.1 68415.m06030 expressed protein
Length = 331
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Frame = +3
Query: 285 ESYDRVISLEQKKRANKIASQLQAEITSATLADEALA-LPSIEQQADQTERPHELDTWRY 461
E+YDR++ L +R N+ A Q + D + S + D T+R +
Sbjct: 182 ENYDRIVELYNVQRFNRQALQTPGRSEDQSQRDSTYTRIDSARESRDWTQRDNNFRPPGG 241
Query: 462 KARNYIMYVPXGRSPRPAAEARTSPP 539
++ Y P + R +R PP
Sbjct: 242 SVPHH-FYGPPMDAARITTSSRDEPP 266
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,436,509
Number of Sequences: 28952
Number of extensions: 252745
Number of successful extensions: 877
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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