Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0838
(631 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 144 3e-34
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 144 3e-34
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 144 3e-34
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 144 3e-34
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 144 3e-34
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 144 3e-34
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 83 1e-15
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 144 bits (348), Expect = 3e-34
Identities = 68/88 (77%), Positives = 78/88 (88%)
Frame = +3
Query: 255 ELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILEDLVFPAEIVG 434
ELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V++AILEDLVFP+EIVG
Sbjct: 82 ELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVG 141
Query: 435 KRIRVKLDGSQLIKVHLDKNQQTTMNIK 518
KRIRVKLDGS+LIKVHLDK QQ + K
Sbjct: 142 KRIRVKLDGSRLIKVHLDKAQQNNVEHK 169
Score = 96.3 bits (229), Expect = 8e-20
Identities = 48/73 (65%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Frame = +1
Query: 28 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 204
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 205 PMPKLKAFQKIQI 243
P+P+LK+FQKIQ+
Sbjct: 65 PVPQLKSFQKIQV 77
Score = 47.6 bits (108), Expect = 4e-05
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +2
Query: 509 EHKVDTFQSVYKKLTGREVTFEFPE 583
EHKV+TF VYKKLTG++V FEFPE
Sbjct: 167 EHKVETFSGVYKKLTGKDVNFEFPE 191
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 144 bits (348), Expect = 3e-34
Identities = 68/88 (77%), Positives = 78/88 (88%)
Frame = +3
Query: 255 ELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILEDLVFPAEIVG 434
ELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V++AILEDLVFP+EIVG
Sbjct: 80 ELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVG 139
Query: 435 KRIRVKLDGSQLIKVHLDKNQQTTMNIK 518
KRIRVKLDGS+LIKVHLDK QQ + K
Sbjct: 140 KRIRVKLDGSRLIKVHLDKAQQNNVEHK 167
Score = 96.3 bits (229), Expect = 8e-20
Identities = 48/73 (65%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Frame = +1
Query: 28 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 204
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 3 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 62
Query: 205 PMPKLKAFQKIQI 243
P+P+LK+FQKIQ+
Sbjct: 63 PVPQLKSFQKIQV 75
Score = 47.6 bits (108), Expect = 4e-05
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +2
Query: 509 EHKVDTFQSVYKKLTGREVTFEFPE 583
EHKV+TF VYKKLTG++V FEFPE
Sbjct: 165 EHKVETFSGVYKKLTGKDVNFEFPE 189
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 144 bits (348), Expect = 3e-34
Identities = 68/88 (77%), Positives = 78/88 (88%)
Frame = +3
Query: 255 ELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILEDLVFPAEIVG 434
ELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V++AILEDLVFP+EIVG
Sbjct: 82 ELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVG 141
Query: 435 KRIRVKLDGSQLIKVHLDKNQQTTMNIK 518
KRIRVKLDGS+LIKVHLDK QQ + K
Sbjct: 142 KRIRVKLDGSRLIKVHLDKAQQNNVEHK 169
Score = 96.3 bits (229), Expect = 8e-20
Identities = 48/73 (65%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Frame = +1
Query: 28 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 204
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 205 PMPKLKAFQKIQI 243
P+P+LK+FQKIQ+
Sbjct: 65 PVPQLKSFQKIQV 77
Score = 47.6 bits (108), Expect = 4e-05
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +2
Query: 509 EHKVDTFQSVYKKLTGREVTFEFPE 583
EHKV+TF VYKKLTG++V FEFPE
Sbjct: 167 EHKVETFSGVYKKLTGKDVNFEFPE 191
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 144 bits (348), Expect = 3e-34
Identities = 68/88 (77%), Positives = 78/88 (88%)
Frame = +3
Query: 255 ELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILEDLVFPAEIVG 434
ELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V++AILEDLVFP+EIVG
Sbjct: 82 ELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVG 141
Query: 435 KRIRVKLDGSQLIKVHLDKNQQTTMNIK 518
KRIRVKLDGS+LIKVHLDK QQ + K
Sbjct: 142 KRIRVKLDGSRLIKVHLDKAQQNNVEHK 169
Score = 96.3 bits (229), Expect = 8e-20
Identities = 48/73 (65%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Frame = +1
Query: 28 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 204
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 205 PMPKLKAFQKIQI 243
P+P+LK+FQKIQ+
Sbjct: 65 PVPQLKSFQKIQV 77
Score = 47.6 bits (108), Expect = 4e-05
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +2
Query: 509 EHKVDTFQSVYKKLTGREVTFEFPE 583
EHKV+TF VYKKLTG++V FEFPE
Sbjct: 167 EHKVETFSGVYKKLTGKDVNFEFPE 191
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 144 bits (348), Expect = 3e-34
Identities = 68/88 (77%), Positives = 78/88 (88%)
Frame = +3
Query: 255 ELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILEDLVFPAEIVG 434
ELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V++AILEDLVFP+EIVG
Sbjct: 82 ELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVG 141
Query: 435 KRIRVKLDGSQLIKVHLDKNQQTTMNIK 518
KRIRVKLDGS+LIKVHLDK QQ + K
Sbjct: 142 KRIRVKLDGSRLIKVHLDKAQQNNVEHK 169
Score = 96.3 bits (229), Expect = 8e-20
Identities = 48/73 (65%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Frame = +1
Query: 28 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 204
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 205 PMPKLKAFQKIQI 243
P+P+LK+FQKIQ+
Sbjct: 65 PVPQLKSFQKIQV 77
Score = 47.6 bits (108), Expect = 4e-05
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +2
Query: 509 EHKVDTFQSVYKKLTGREVTFEFPE 583
EHKV+TF VYKKLTG++V FEFPE
Sbjct: 167 EHKVETFSGVYKKLTGKDVNFEFPE 191
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 144 bits (348), Expect = 3e-34
Identities = 68/88 (77%), Positives = 78/88 (88%)
Frame = +3
Query: 255 ELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILEDLVFPAEIVG 434
ELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V++AILEDLVFP+EIVG
Sbjct: 82 ELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVG 141
Query: 435 KRIRVKLDGSQLIKVHLDKNQQTTMNIK 518
KRIRVKLDGS+LIKVHLDK QQ + K
Sbjct: 142 KRIRVKLDGSRLIKVHLDKAQQNNVEHK 169
Score = 96.3 bits (229), Expect = 8e-20
Identities = 48/73 (65%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Frame = +1
Query: 28 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYV 204
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 205 PMPKLKAFQKIQI 243
P+P+LK+FQKIQ+
Sbjct: 65 PVPQLKSFQKIQV 77
Score = 47.6 bits (108), Expect = 4e-05
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +2
Query: 509 EHKVDTFQSVYKKLTGREVTFEFPE 583
EHKV+TF VYKKLTG++V FEFPE
Sbjct: 167 EHKVETFSGVYKKLTGKDVNFEFPE 191
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 82.6 bits (195), Expect = 1e-15
Identities = 40/51 (78%), Positives = 46/51 (90%)
Frame = +3
Query: 366 SRTLTSVYNAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTMNIK 518
SRTLT+V++AILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ + K
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHK 60
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,480,185
Number of Sequences: 237096
Number of extensions: 1765604
Number of successful extensions: 3688
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3682
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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