Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0838
(631 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g16130.1 68418.m01884 40S ribosomal protein S7 (RPS7C) 40S ri... 95 5e-20
At3g02560.2 68416.m00247 40S ribosomal protein S7 (RPS7B) simila... 92 3e-19
At3g02560.1 68416.m00246 40S ribosomal protein S7 (RPS7B) simila... 92 3e-19
At1g48830.2 68414.m05465 40S ribosomal protein S7 (RPS7A) simila... 92 3e-19
At1g48830.1 68414.m05464 40S ribosomal protein S7 (RPS7A) simila... 92 3e-19
At3g10420.2 68416.m01250 sporulation protein-related similar to ... 30 1.5
At3g10420.1 68416.m01249 sporulation protein-related similar to ... 30 1.5
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 29 3.4
At1g59870.1 68414.m06745 ABC transporter family protein similar ... 29 3.4
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 29 3.4
At3g01380.1 68416.m00060 phosphatidylinositolglycan class N (PIG... 28 4.4
At5g35970.1 68418.m04332 DNA-binding protein, putative similar t... 27 7.8
At1g11130.1 68414.m01274 leucine-rich repeat family protein / pr... 27 7.8
>At5g16130.1 68418.m01884 40S ribosomal protein S7 (RPS7C) 40S
ribosomal protein S7 homolog - Brassica oleracea,
EMBL:AF144752
Length = 190
Score = 94.7 bits (225), Expect = 5e-20
Identities = 48/88 (54%), Positives = 62/88 (70%)
Frame = +3
Query: 255 ELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILEDLVFPAEIVG 434
ELEKKFSGK V+FV R+I+ P V +RPR+RTLTSV+ A+LED+ FPAEIVG
Sbjct: 83 ELEKKFSGKDVIFVTTRRIMRPPKKGAAV----QRPRNRTLTSVHEAMLEDVAFPAEIVG 138
Query: 435 KRIRVKLDGSQLIKVHLDKNQQTTMNIK 518
KR R +LDGS+++KV LD ++ K
Sbjct: 139 KRTRYRLDGSKIMKVFLDAKEKNNTEYK 166
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/70 (44%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Frame = +1
Query: 34 KIIKASGAEADSFETSISQALVELE-TNSDLKAQLRELYITKAKEIELH-NKKSIIIYVP 207
KI K AE E ++QAL +LE TN +LK++L++LYI +A +++ N+K+++IYVP
Sbjct: 7 KIKKDKNAEPTECEEQVAQALFDLENTNQELKSELKDLYINQAVHMDISGNRKAVVIYVP 66
Query: 208 MPKLKAFQKI 237
KAF+KI
Sbjct: 67 FRLRKAFRKI 76
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 482 LRQKPTDYYEHKVDTFQSVYKKLTGREVTFEFP 580
L K + E+K++T VY+KLTG++V FE+P
Sbjct: 155 LDAKEKNNTEYKLETMVGVYRKLTGKDVVFEYP 187
>At3g02560.2 68416.m00247 40S ribosomal protein S7 (RPS7B) similar
to ribosomal protein S7 GB:AAD26256 from [Secale
cereale]
Length = 191
Score = 91.9 bits (218), Expect = 3e-19
Identities = 46/88 (52%), Positives = 62/88 (70%)
Frame = +3
Query: 255 ELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILEDLVFPAEIVG 434
ELEKKFSGK V+FV R+I+ P + V +RPR+RTLTSV+ A+LED+ +PAEIVG
Sbjct: 83 ELEKKFSGKDVIFVATRRIMRPPKKGSAV----QRPRNRTLTSVHEAMLEDVAYPAEIVG 138
Query: 435 KRIRVKLDGSQLIKVHLDKNQQTTMNIK 518
KR R +LDG++++KV LD + K
Sbjct: 139 KRTRYRLDGTKIMKVFLDSKLKNDTEYK 166
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/72 (43%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Frame = +1
Query: 34 KIIKASGAEADSFETSISQALVELE-TNSDLKAQLRELYITKAKEIELH-NKKSIIIYVP 207
KI K G FE ++QAL +LE TN +LK++L++LYI +A ++++ N+K+++IYVP
Sbjct: 7 KIHKDKGVAPTEFEEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKAVVIYVP 66
Query: 208 MPKLKAFQKIQI 243
KAF+KI +
Sbjct: 67 FRLRKAFRKIHL 78
Score = 36.3 bits (80), Expect = 0.017
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +2
Query: 509 EHKVDTFQSVYKKLTGREVTFEFP 580
E+K++T VY+KLTG++V FE+P
Sbjct: 164 EYKLETMVGVYRKLTGKDVVFEYP 187
>At3g02560.1 68416.m00246 40S ribosomal protein S7 (RPS7B) similar
to ribosomal protein S7 GB:AAD26256 from [Secale
cereale]
Length = 191
Score = 91.9 bits (218), Expect = 3e-19
Identities = 46/88 (52%), Positives = 62/88 (70%)
Frame = +3
Query: 255 ELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILEDLVFPAEIVG 434
ELEKKFSGK V+FV R+I+ P + V +RPR+RTLTSV+ A+LED+ +PAEIVG
Sbjct: 83 ELEKKFSGKDVIFVATRRIMRPPKKGSAV----QRPRNRTLTSVHEAMLEDVAYPAEIVG 138
Query: 435 KRIRVKLDGSQLIKVHLDKNQQTTMNIK 518
KR R +LDG++++KV LD + K
Sbjct: 139 KRTRYRLDGTKIMKVFLDSKLKNDTEYK 166
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/72 (43%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Frame = +1
Query: 34 KIIKASGAEADSFETSISQALVELE-TNSDLKAQLRELYITKAKEIELH-NKKSIIIYVP 207
KI K G FE ++QAL +LE TN +LK++L++LYI +A ++++ N+K+++IYVP
Sbjct: 7 KIHKDKGVAPTEFEEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKAVVIYVP 66
Query: 208 MPKLKAFQKIQI 243
KAF+KI +
Sbjct: 67 FRLRKAFRKIHL 78
Score = 36.3 bits (80), Expect = 0.017
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +2
Query: 509 EHKVDTFQSVYKKLTGREVTFEFP 580
E+K++T VY+KLTG++V FE+P
Sbjct: 164 EYKLETMVGVYRKLTGKDVVFEYP 187
>At1g48830.2 68414.m05465 40S ribosomal protein S7 (RPS7A) similar
to 40S ribosomal protein S7 homolog GI:5532505 from
[Brassica oleracea]
Length = 191
Score = 91.9 bits (218), Expect = 3e-19
Identities = 47/88 (53%), Positives = 63/88 (71%)
Frame = +3
Query: 255 ELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILEDLVFPAEIVG 434
ELEKKFSGK V+ + R+I+ +P K A KRPR+RTLTSV+ AIL+D+V PAEIVG
Sbjct: 83 ELEKKFSGKDVILIATRRIV-RPPKKGSAA---KRPRNRTLTSVHEAILDDVVLPAEIVG 138
Query: 435 KRIRVKLDGSQLIKVHLDKNQQTTMNIK 518
KR R +LDG++++KV LD ++ K
Sbjct: 139 KRTRYRLDGTKIMKVFLDPKERNNTEYK 166
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +2
Query: 482 LRQKPTDYYEHKVDTFQSVYKKLTGREVTFEFP 580
L K + E+KV+ F +VYKKLTG++V FEFP
Sbjct: 155 LDPKERNNTEYKVEAFSAVYKKLTGKDVVFEFP 187
>At1g48830.1 68414.m05464 40S ribosomal protein S7 (RPS7A) similar
to 40S ribosomal protein S7 homolog GI:5532505 from
[Brassica oleracea]
Length = 191
Score = 91.9 bits (218), Expect = 3e-19
Identities = 47/88 (53%), Positives = 63/88 (71%)
Frame = +3
Query: 255 ELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILEDLVFPAEIVG 434
ELEKKFSGK V+ + R+I+ +P K A KRPR+RTLTSV+ AIL+D+V PAEIVG
Sbjct: 83 ELEKKFSGKDVILIATRRIV-RPPKKGSAA---KRPRNRTLTSVHEAILDDVVLPAEIVG 138
Query: 435 KRIRVKLDGSQLIKVHLDKNQQTTMNIK 518
KR R +LDG++++KV LD ++ K
Sbjct: 139 KRTRYRLDGTKIMKVFLDPKERNNTEYK 166
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +2
Query: 482 LRQKPTDYYEHKVDTFQSVYKKLTGREVTFEFP 580
L K + E+KV+ F +VYKKLTG++V FEFP
Sbjct: 155 LDPKERNNTEYKVEAFSAVYKKLTGKDVVFEFP 187
>At3g10420.2 68416.m01250 sporulation protein-related similar to
hypothetical proteins: GB:P51281 [Chloroplast Porphyra
purpurea], GB:BAA16982 [Synechocystis sp], GB:P49540
[Odontella sinensis], GB:AAB82669 [Chloroplast Cyanidium
caldarium]; similar to stage III sporulation protein AA
(GI:18145497) [Clostridium perfringens str. 13]; similar
to stage III sporulation protein AA (mutants block
sporulation after engulfment) (GI:22777578)
[Oceanobacillus iheyensis]
Length = 684
Score = 29.9 bits (64), Expect = 1.5
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +3
Query: 183 EVDHHLCADA*TEGLSEDPDQACPELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRP 362
+V H L E L E+P P L + F + + D L S+K R +N P
Sbjct: 415 DVPHKLVTPIPLENLEEEP---APLLNRDFVSELLSDDEDEDFLLIRSNKAR-SNTYTSP 470
Query: 363 RSRTL-TSVYNAILEDLVFPAEIVG 434
RS + YN + DL+ AE++G
Sbjct: 471 RSSPVHVYTYNVLEADLLQVAEVMG 495
>At3g10420.1 68416.m01249 sporulation protein-related similar to
hypothetical proteins: GB:P51281 [Chloroplast Porphyra
purpurea], GB:BAA16982 [Synechocystis sp], GB:P49540
[Odontella sinensis], GB:AAB82669 [Chloroplast Cyanidium
caldarium]; similar to stage III sporulation protein AA
(GI:18145497) [Clostridium perfringens str. 13]; similar
to stage III sporulation protein AA (mutants block
sporulation after engulfment) (GI:22777578)
[Oceanobacillus iheyensis]
Length = 547
Score = 29.9 bits (64), Expect = 1.5
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +3
Query: 183 EVDHHLCADA*TEGLSEDPDQACPELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRP 362
+V H L E L E+P P L + F + + D L S+K R +N P
Sbjct: 415 DVPHKLVTPIPLENLEEEP---APLLNRDFVSELLSDDEDEDFLLIRSNKAR-SNTYTSP 470
Query: 363 RSRTL-TSVYNAILEDLVFPAEIVG 434
RS + YN + DL+ AE++G
Sbjct: 471 RSSPVHVYTYNVLEADLLQVAEVMG 495
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 347 QTKEATLKDIDLCVQCYPRGLG 412
Q +E++LK CV+CYP G G
Sbjct: 179 QRRESSLKYQTRCVRCYPNGTG 200
>At1g59870.1 68414.m06745 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1469
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 366 SRTLTSVYNAILEDLVFPAEIVGKRIRV-KLDG 461
SR T++ NA++ED V+ +++ K + V KLDG
Sbjct: 65 SRLRTTLMNAVVEDDVYGNQLMSKEVDVTKLDG 97
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 347 QTKEATLKDIDLCVQCYPRGLG 412
Q +E++LK CV+CYP G G
Sbjct: 178 QRRESSLKYQTRCVRCYPNGTG 199
>At3g01380.1 68416.m00060 phosphatidylinositolglycan class N (PIG-N)
family protein similar to phosphatidylinositolglycan
class N short form GB:BAA82620 [gi:5631308] [Mus
musculus]
Length = 921
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -1
Query: 526 GVHFMFIVVCWFLSKCTLMSCE-PSNLTLMRLPTISAGKT 410
G+ + CWFLS TLM E P N L+ P + A T
Sbjct: 640 GIPVFVCISCWFLSVFTLMPAEIPDNNNLVS-PFLGANDT 678
>At5g35970.1 68418.m04332 DNA-binding protein, putative similar to
SWISS-PROT:Q60560 DNA-binding protein SMUBP-2
(Immunoglobulin MU binding protein 2, SMUBP-2)
[Mesocricetus auratus]
Length = 961
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +1
Query: 4 PSRKVVKMSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNK 183
P + V+ M ++ +KA D F + +SQ L+++E +++L+ EL + + +
Sbjct: 245 PVQGVLGMDSEKVKAIQERIDEFTSQMSQ-LLQVERDTELEVTQEELDVVPTPDESSDSS 303
Query: 184 KSI 192
K I
Sbjct: 304 KPI 306
>At1g11130.1 68414.m01274 leucine-rich repeat family protein /
protein kinase family protein contains leucine
rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to leucine-rich
repeat transmembrane protein kinase 2 [Zea mays]
gi|3360291|gb|AAC27895
Length = 768
Score = 27.5 bits (58), Expect = 7.8
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -1
Query: 466 CEPSNLTLMRLPTISAGKTKSSRIALYTEVNVLE 365
C+ SN+T +R+P + G S +A ++ + V++
Sbjct: 66 CDSSNITEIRIPGMKVGGGLSDTLADFSSIQVMD 99
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,652,325
Number of Sequences: 28952
Number of extensions: 248875
Number of successful extensions: 722
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1285411824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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