Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0837
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   2.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   2.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.6  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 482 HRSCNNYWRVKSNL 523
           H SC+ YW+  +N+
Sbjct: 35  HTSCDKYWKCDNNV 48


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 482 HRSCNNYWRVKSNL 523
           H SC+ YW+  +N+
Sbjct: 35  HTSCDKYWKCDNNV 48


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 421 SRASPPEAKDLRTRLKMRISPSAEPTD 341
           S  S  E KD+ T L    SP+ +P D
Sbjct: 116 SPKSEKEEKDMETTLTPCASPNRKPDD 142


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 648 TSWATYSRTRLTSAA*SVR*TGIFSRKLLTAGPTSRP 538
           TS  TYS   + ++  SV  T  +   L   G TS+P
Sbjct: 91  TSNPTYSSRSVMTSCSSVPTTASYGSDLYFPGATSQP 127


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +1

Query: 232 GRVTDVKAMTSAPCICVVSATSAPDST*SWLF 327
           G +     +  A C C  S +  P ST  W F
Sbjct: 541 GCLIQFNTIVFAFCYCYYSISIRPISTLGWFF 572


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,526
Number of Sequences: 336
Number of extensions: 2596
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)