Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0836
(779 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 43 3e-04
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 41 0.001
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 38 0.012
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.34
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 1.4
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 30 1.8
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 29 4.2
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 29 4.2
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 29 4.2
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_42753| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_56319| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_37182| Best HMM Match : DUF225 (HMM E-Value=1) 28 7.4
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 28 7.4
SB_5845| Best HMM Match : Ribosomal_S27 (HMM E-Value=8.3) 28 7.4
SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 9.8
SB_30797| Best HMM Match : Notch (HMM E-Value=2.4e-07) 28 9.8
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +2
Query: 518 LIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA----LVGIV 685
L + + +C+ +Y G V + CAG R+G N D G P ++ L G V
Sbjct: 228 LPIASHNDCKNKYYG---VSSTAHLCAGEARSGASGGCNGDSGGPLVCEDNGRWYLHGAV 284
Query: 686 SFGKSNANDIYPVVLTSISSFTEWI 760
S+GK + Y V ++S+T+WI
Sbjct: 285 SYGKLHCPTTYYTVFARVASYTDWI 309
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +2
Query: 497 RQPPKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA-- 670
R P + L + + ENCR +Y V + CAG R+ N D G P ++
Sbjct: 906 RHPQQAMLPIASHENCRRKYGD---VSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGS 962
Query: 671 --LVGIVSFGKSNANDIYPVVLTSISSFTEWI 760
L G VS+G + V ++S+T+WI
Sbjct: 963 WFLHGAVSYGMKYCPTTHYTVFARVASYTDWI 994
Score = 36.7 bits (81), Expect = 0.021
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +2
Query: 542 CREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA----LVGIVSFGKSNAN 709
CR+QY+ DR CAG R G N D G P + + L G VS+G
Sbjct: 649 CRKQYRV-DRTAHP---CAGEARVGAAGGCNGDSGGPLVCEQSGVWVLHGAVSYGARWCP 704
Query: 710 DIYPVVLTSISSFTEWI 760
Y V T +SS+ WI
Sbjct: 705 TDYYTVFTRVSSYVAWI 721
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Frame = +2
Query: 524 VTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQN-------ALVGI 682
+ +++ C Q DR+ T+N CAG+ R GG D D G P N LVG+
Sbjct: 373 LVSRDQCSHQQSYGDRI-TENMLCAGM-RQGGVDSCQGDSGGPFVCTNPENPRQWTLVGV 430
Query: 683 VSFGKSNANDIYPVVLTSISSFTEWI 760
S+GK A + + ++ + WI
Sbjct: 431 TSWGKGCARALKYGIYANVRRYLHWI 456
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = +2
Query: 518 LIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA----LVGIV 685
L + + ENCR +Y V + CAG R+ N D G P ++ L G V
Sbjct: 583 LPIASHENCRRKYGD---VSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGSWFLHGAV 639
Query: 686 SFGKSNANDIYPVVLTSISSFTEWI 760
S+G N + V ++S+T+WI
Sbjct: 640 SYGLRNCPTTHYTVFARVASYTDWI 664
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +2
Query: 524 VTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQN----ALVGIVSF 691
+ + E+C+ +Y + + CAG + D G P + L G+VSF
Sbjct: 94 IASHEDCKRKYGSG--IYSYTHLCAGEAKPNAAGACQGDSGGPLVCERNGQWTLYGVVSF 151
Query: 692 GKSNANDIYPVVLTSISSFTEWILK 766
G N V T +S++ +WI K
Sbjct: 152 GAGNCEVTSYTVYTKVSNYLDWITK 176
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 32.7 bits (71), Expect = 0.34
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 12/92 (13%)
Frame = +2
Query: 524 VTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQN------------ 667
+ + + CR+ + D +VT N FCAG + D D G P N
Sbjct: 273 IVDIQTCRKAHP--DYIVTANMFCAGFENSSRGDACQGDSGGPFSVDNPLPATPKGQHRH 330
Query: 668 ALVGIVSFGKSNANDIYPVVLTSISSFTEWIL 763
L+G++S+G V T + +F +WIL
Sbjct: 331 VLLGVISWGDGCGKFGKYGVYTRLFNFIDWIL 362
Score = 29.9 bits (64), Expect = 2.4
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +3
Query: 312 HPEFSEENYDKDVSIVRVTHAIHF 383
HP +S ++YD D++++R+ + F
Sbjct: 199 HPHYSPDSYDSDIALIRLAQPVTF 222
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -1
Query: 656 RQGHPSQYCRSRGHQPGPNRR--RICYQSRRD 567
RQG P +YCRS Q GP RR R Y +R+
Sbjct: 338 RQGTPDEYCRSSVKQIGPFRRFERRGYSKKRN 369
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 677 LLAHFGRRQGHPSQYCRSRGHQPGPNRRRICYQSRRDHDPCTV 549
L+ H G R +PS+ C + P +++ YQS+ HD C +
Sbjct: 162 LICH-GCRGINPSKVCAACNGDFAPGEKKVGYQSKTFHDKCFI 203
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +2
Query: 575 VTDNKFCAGLVRAGGRDYDNTDLGAPAFFQN----ALVGIVSFGKSNANDIYPVVLTSIS 742
V+ CA + G D D G P +N LVG+ S+G A+ YP + ++
Sbjct: 384 VSSTMLCA---QVPGIDTCQGDSGGPLVCENNNKWTLVGVTSWGYGCAHPDYPGIYAKLT 440
Query: 743 SFTEWI 760
+W+
Sbjct: 441 ELKDWV 446
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 29.1 bits (62), Expect = 4.2
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Frame = +2
Query: 515 ELIVTNKENCREQYKGHDRVVTD-NKFCAGLVRAGGRDYDNTDLGAPAFFQNA----LVG 679
EL+V + C ++ G V D + CAG GG D+ G P A L G
Sbjct: 551 ELVVASNAKC-DKKNGELLPVDDASMVCAGGPGRGGCQGDS---GGPLVCNEAGRWVLRG 606
Query: 680 IVSFGKSNANDIYPVVLTSISSFTEWI 760
IVS+G + + V T + ++ WI
Sbjct: 607 IVSWGSRECSTEFYTVFTRVINYMPWI 633
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 29.1 bits (62), Expect = 4.2
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Frame = +2
Query: 515 ELIVTNKENCREQYKGHDRVVTD-NKFCAGLVRAGGRDYDNTDLGAPAFFQNA----LVG 679
EL+V + C ++ G V D + CAG GG D+ G P A L G
Sbjct: 91 ELVVASNAKC-DKKNGELLPVDDASMVCAGGPGRGGCQGDS---GGPLVCNEAGRWVLRG 146
Query: 680 IVSFGKSNANDIYPVVLTSISSFTEWI 760
IVS+G + + V T + ++ WI
Sbjct: 147 IVSWGSRECSTEFYTVFTRVINYMPWI 173
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 524 VTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA 670
V N C++ Y+ VT N CAG + RD N D G F ++
Sbjct: 1321 VVNHNACKKAYENETWPVTSNMLCAG-YKNKSRDSCNRDSGGGFVFYDS 1368
>SB_42753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 28.7 bits (61), Expect = 5.6
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Frame = +3
Query: 102 SQPGPN*SIPTHLESMVPTVRWY----CSHQLPLPFNCYLFPWRILRSCIPSHYRGSSRR 269
S PGPN P E + + WY S P N YL+ + +S P H+ G
Sbjct: 110 SMPGPNFPTPVKSERFLNLLSWYKPSLFSSYEPAT-NAYLY--KGFKSGFPLHFEGD--- 163
Query: 270 SEPGEISYVHFAVNHPEFSEENYDKDVSIVRVTHAIHFGP 389
E + + A +HPE + K++ R+ + P
Sbjct: 164 LESIQSQILLSAFDHPEIVDAKLFKELEAHRLAGSFGIPP 203
>SB_56319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Frame = +3
Query: 216 WRILRS---CIPSHYRGSSRRSEPGE 284
WRILR+ C HYR + R EPGE
Sbjct: 99 WRILRTKTTCPVRHYRFNRRVQEPGE 124
>SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -1
Query: 509 LEVAVRYTAALNGSSPSEQI-NKNTLGYYDTLLDNSTLLDVWAEVDGMCYSYDAHILVVI 333
+++ V Y AA+ S Q N+N L Y + D + A + M SY+ + +
Sbjct: 303 MKIKVNYVAAVQDESTYSQFYNENNLKYEEEFTDVLENIKTRARIVIMVTSYNMAVEGMH 362
Query: 332 LLREFGMVNSK 300
L + G++N +
Sbjct: 363 LAKNRGLINGE 373
>SB_37182| Best HMM Match : DUF225 (HMM E-Value=1)
Length = 1282
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 179 PTTTTFQLLPVSMENSTILHTVALSRIFPSQ*AR*N---ILCSLCC*PSRIL*GELRQGC 349
P+ ++P++ + H V +S FPS+ A + I CS C P R+L C
Sbjct: 747 PSRAHVDVIPIACSCRCVPHHVLMSMCFPSR-AHVDVFPITCSCRCVPHRVLMSMCSPSC 805
Query: 350 EH 355
H
Sbjct: 806 AH 807
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 28.3 bits (60), Expect = 7.4
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Frame = +2
Query: 515 ELIVTNKENCREQYKGHDRV--------VTDNKFCAGLVRAGGRDYDNTDLGAPAFFQN- 667
+L V + C E++ G + VT+ CAG G++ N D G P +N
Sbjct: 178 DLRVVSNRACSERHMGSKNMRLENGTWRVTETMLCAGDAGKTGKNGCNGDSGGPFVCRNT 237
Query: 668 ----ALVGIVSFGKSNANDI-YPVVLTSISSFTEWILK 766
L G+VS+G + + V +S WI K
Sbjct: 238 AGQWVLQGVVSWGDPECSSANHFSVFARVSVLRHWIDK 275
>SB_5845| Best HMM Match : Ribosomal_S27 (HMM E-Value=8.3)
Length = 265
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Frame = +3
Query: 216 WRILRS---CIPSHYRGSSRRSEPGE 284
WRILR+ C HYR + R EPGE
Sbjct: 63 WRILRTKTKCPVRHYRFNRRVQEPGE 88
>SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 677
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1
Query: 722 RGRCHWHCSFQKIRCLLAHFGRRQGHPSQYCRSRGHQPGPNRRRICY 582
R CH F+++ LLA F R+ HP + R H P R++C+
Sbjct: 249 RQMCHPLAPFRQMCYLLAPFRRQMCHPLAHFRQMCHPLAP-FRQMCH 294
>SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 473
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 106 SLVQIEVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFY 228
+LV +E + P N+W ++ +LT Y STA G+ Y
Sbjct: 111 NLVSMERYDPSTNEWEEEAVAPMLTARKYFSTAV-LDGKLY 150
>SB_30797| Best HMM Match : Notch (HMM E-Value=2.4e-07)
Length = 778
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/60 (21%), Positives = 25/60 (41%)
Frame = -2
Query: 616 TSPDQTGAEFVISHDAIMTLVLFPAVFFVGHNEFELWRLPSDTLPP*TVVPHPSRSTKIP 437
+S +QT + + L ++P + W++P+ TLP T + K+P
Sbjct: 213 SSDNQTTLVPTVVKPEFLPLTVYPVIINDNDRAINYWQIPNSTLPRPTWIALSQEEYKVP 272
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,585,933
Number of Sequences: 59808
Number of extensions: 634922
Number of successful extensions: 1573
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1568
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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