Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0835
         (442 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.9  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    20   9.1  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 97  FIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTST 219
           F++  FI +L+T   I+Y+++ +    F  T  +F   TST
Sbjct: 145 FVFCYFI-YLFTVYYIYYSVHEASIINFGYTLAKFMIFTST 184


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 145 FYNIYWSKYNIFSTTFFRFSWNTSTIFRLSR 237
           FY IY   YNI + +   +    +T  R+++
Sbjct: 39  FYKIYKYTYNIVAVSLTAYMVYITTNLRITQ 69


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 92  YPLFTGLSLNSYILKI 139
           YPLF  L +++ +LKI
Sbjct: 158 YPLFVLLIVSNVVLKI 173


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,778
Number of Sequences: 336
Number of extensions: 1440
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)