Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0834
         (438 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56080-1|AAB01209.1|  704|Drosophila melanogaster p21-activated ...    29   2.8  
U49446-1|AAC47094.1|  704|Drosophila melanogaster serine/threoni...    29   2.8  
BT010291-1|AAQ23609.1|  704|Drosophila melanogaster LD20767p pro...    29   2.8  
AE014297-447|AAN13373.1|  704|Drosophila melanogaster CG10295-PC...    29   2.8  
AE014297-446|AAF54132.1|  704|Drosophila melanogaster CG10295-PB...    29   2.8  
AE014297-445|AAF54131.1|  704|Drosophila melanogaster CG10295-PA...    29   2.8  
AE013599-302|AAF59293.1|  328|Drosophila melanogaster CG12835-PA...    27   8.4  

>U56080-1|AAB01209.1|  704|Drosophila melanogaster p21-activated
           protein kinase 1Dpak1 protein.
          Length = 704

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -3

Query: 304 SLSIVTTATPPFKPKRIMLHGRNKQGG--GTYPRGLTSGPTTSNYA 173
           SLS V++++P   P    LHG N  G   G     +T GP  +N A
Sbjct: 163 SLSRVSSSSPSSTPTDSELHGSNSGGNLIGVQLGSMTLGPNANNVA 208


>U49446-1|AAC47094.1|  704|Drosophila melanogaster serine/threonine
           kinase PAK homologDPAK protein.
          Length = 704

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -3

Query: 304 SLSIVTTATPPFKPKRIMLHGRNKQGG--GTYPRGLTSGPTTSNYA 173
           SLS V++++P   P    LHG N  G   G     +T GP  +N A
Sbjct: 163 SLSRVSSSSPSSTPTDSELHGSNSGGNLIGVQLGSMTLGPNANNVA 208


>BT010291-1|AAQ23609.1|  704|Drosophila melanogaster LD20767p
           protein.
          Length = 704

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -3

Query: 304 SLSIVTTATPPFKPKRIMLHGRNKQGG--GTYPRGLTSGPTTSNYA 173
           SLS V++++P   P    LHG N  G   G     +T GP  +N A
Sbjct: 163 SLSRVSSSSPSSTPTDSELHGSNSGGNLIGVQLGSMTLGPNANNVA 208


>AE014297-447|AAN13373.1|  704|Drosophila melanogaster CG10295-PC,
           isoform C protein.
          Length = 704

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -3

Query: 304 SLSIVTTATPPFKPKRIMLHGRNKQGG--GTYPRGLTSGPTTSNYA 173
           SLS V++++P   P    LHG N  G   G     +T GP  +N A
Sbjct: 163 SLSRVSSSSPSSTPTDSELHGSNSGGNLIGVQLGSMTLGPNANNVA 208


>AE014297-446|AAF54132.1|  704|Drosophila melanogaster CG10295-PB,
           isoform B protein.
          Length = 704

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -3

Query: 304 SLSIVTTATPPFKPKRIMLHGRNKQGG--GTYPRGLTSGPTTSNYA 173
           SLS V++++P   P    LHG N  G   G     +T GP  +N A
Sbjct: 163 SLSRVSSSSPSSTPTDSELHGSNSGGNLIGVQLGSMTLGPNANNVA 208


>AE014297-445|AAF54131.1|  704|Drosophila melanogaster CG10295-PA,
           isoform A protein.
          Length = 704

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -3

Query: 304 SLSIVTTATPPFKPKRIMLHGRNKQGG--GTYPRGLTSGPTTSNYA 173
           SLS V++++P   P    LHG N  G   G     +T GP  +N A
Sbjct: 163 SLSRVSSSSPSSTPTDSELHGSNSGGNLIGVQLGSMTLGPNANNVA 208


>AE013599-302|AAF59293.1|  328|Drosophila melanogaster CG12835-PA
           protein.
          Length = 328

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +2

Query: 89  CTQQMFTID--FHGEGITSCNKNQTRKIIICVITGGRTTCESARI 217
           C Q+  + +  FH  GI SCN      + + ++TG  T  + ARI
Sbjct: 201 CVQRKLSSEDQFHSSGI-SCNGETDDDVEVAMLTGSLTPSQIARI 244


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,983,156
Number of Sequences: 53049
Number of extensions: 509887
Number of successful extensions: 1027
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)