BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0832
(834 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052104-1|AAK93528.1| 712|Drosophila melanogaster SD05186p pro... 33 0.36
AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA ... 33 0.36
>AY052104-1|AAK93528.1| 712|Drosophila melanogaster SD05186p
protein.
Length = 712
Score = 33.5 bits (73), Expect = 0.36
Identities = 13/34 (38%), Positives = 25/34 (73%)
Frame = +1
Query: 13 QMVALLRQIQSNAELFNSCLMTLSNDHKEALQIA 114
+M+ +++Q++SN E+ +C TLS + ++ALQ A
Sbjct: 669 RMLTIVKQVESNPEVMAACASTLSPEQQQALQDA 702
>AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA
protein.
Length = 1105
Score = 33.5 bits (73), Expect = 0.36
Identities = 13/34 (38%), Positives = 25/34 (73%)
Frame = +1
Query: 13 QMVALLRQIQSNAELFNSCLMTLSNDHKEALQIA 114
+M+ +++Q++SN E+ +C TLS + ++ALQ A
Sbjct: 1062 RMLTIVKQVESNPEVMAACASTLSPEQQQALQDA 1095
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,724,722
Number of Sequences: 53049
Number of extensions: 653352
Number of successful extensions: 1481
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -