Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0832
         (834 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99288-5|CAB16548.2|  336|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z47811-4|CAD57701.1|  422|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>Z99288-5|CAB16548.2|  336|Caenorhabditis elegans Hypothetical
           protein ZK262.6 protein.
          Length = 336

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = +1

Query: 418 ISPYLRSCQQFRDCTY*KFEMTKDGLI*QNQTDNALRYVVCYAALLISTLLLGVCTYYFG 597
           +S YL  C     C   K      G +  + T N   Y +    ++ISTL+   C+Y++G
Sbjct: 112 VSYYLGLCLALIRCIIMKMSRNAPGFL--STTRNG--YFLTLFLIIISTLIS--CSYFYG 165

Query: 598 YNLLK 612
           Y ++K
Sbjct: 166 YKIIK 170


>Z47811-4|CAD57701.1|  422|Caenorhabditis elegans Hypothetical
           protein K02C4.5 protein.
          Length = 422

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -3

Query: 556 LTKQHNILHNVVRYQFDFVKSGHLSSFRTSNMYNHGTVDMTVNMEKCNRTI 404
           + K H+   N ++   D  K+ HL+ ++  N+Y+ G VD+   M +   ++
Sbjct: 49  IAKVHSRTANNLKKYMDPKKNEHLNLWKMCNVYSCGAVDLDKAMRETRSSL 99


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,942,194
Number of Sequences: 27780
Number of extensions: 361967
Number of successful extensions: 912
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)