Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0831
         (751 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z97190-2|CAM06586.1|  650|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z66564-7|CAA91472.2|  650|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AF016418-2|AAK18901.1|  893|Caenorhabditis elegans Hypothetical ...    28   6.2  

>Z97190-2|CAM06586.1|  650|Caenorhabditis elegans Hypothetical
           protein F52D10.6 protein.
          Length = 650

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = -1

Query: 169 AYIYL*PYSINVCDILDRRQKHLNLSKLYKGLYKYFIISHHMHLSSYYYFKEY 11
           A++ L  Y + +  + D+   H N  KL+ G + YF         SYY+F+ +
Sbjct: 579 AHLSLMDYGVGLPTVADKIDNHENCFKLFYGSHTYF-----FRTDSYYFFERW 626


>Z66564-7|CAA91472.2|  650|Caenorhabditis elegans Hypothetical
           protein F52D10.6 protein.
          Length = 650

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = -1

Query: 169 AYIYL*PYSINVCDILDRRQKHLNLSKLYKGLYKYFIISHHMHLSSYYYFKEY 11
           A++ L  Y + +  + D+   H N  KL+ G + YF         SYY+F+ +
Sbjct: 579 AHLSLMDYGVGLPTVADKIDNHENCFKLFYGSHTYF-----FRTDSYYFFERW 626


>AF016418-2|AAK18901.1|  893|Caenorhabditis elegans Hypothetical
           protein C49G7.7 protein.
          Length = 893

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
 Frame = -1

Query: 499 NFRE*LILDSRSLKSPNKLQYVYLLYKWYYLAIFRQEML*HMNSIFNSSN--IPYLSSLS 326
           + R  L+ D   L S   +  +Y LY+        Q+ +  +N   +SSN  + +LSS  
Sbjct: 495 SLRSTLVFDGPGLSSGCYISNLYQLYQTTNQWTSSQKSIIVLNLEASSSNDKLLFLSSKY 554

Query: 325 LSRMGDLVKIQ 293
           L+ +G++VK+Q
Sbjct: 555 LAGIGEMVKLQ 565


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,701,401
Number of Sequences: 27780
Number of extensions: 317491
Number of successful extensions: 563
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)