Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0827
(760 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061090-1|AAL28638.1| 90|Drosophila melanogaster LD07775p pro... 123 2e-28
AF218862-1|AAF31702.1| 90|Drosophila melanogaster Smt3 protein. 123 2e-28
AF053083-1|AAD19219.1| 90|Drosophila melanogaster ubiquitin-li... 123 2e-28
AE014134-1209|AAF52470.1| 90|Drosophila melanogaster CG4494-PA... 123 2e-28
BT003801-1|AAO41484.1| 504|Drosophila melanogaster AT23571p pro... 29 9.1
AJ294538-1|CAC82378.1| 660|Drosophila melanogaster Lasp protein... 29 9.1
AE014296-2785|AAN11739.2| 657|Drosophila melanogaster CG3849-PB... 29 9.1
AE014296-2784|AAF49426.3| 504|Drosophila melanogaster CG3849-PA... 29 9.1
>AY061090-1|AAL28638.1| 90|Drosophila melanogaster LD07775p
protein.
Length = 90
Score = 123 bits (297), Expect = 2e-28
Identities = 58/62 (93%), Positives = 60/62 (96%), Gaps = 1/62 (1%)
Frame = +3
Query: 72 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 248
M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60
Query: 249 PI 254
PI
Sbjct: 61 PI 62
Score = 59.3 bits (137), Expect = 6e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 254 NENDTPTSLEMEEGDTIEVYQQQTGG 331
NENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 63 NENDTPTSLEMEEGDTIEVYQQQTGG 88
>AF218862-1|AAF31702.1| 90|Drosophila melanogaster Smt3 protein.
Length = 90
Score = 123 bits (297), Expect = 2e-28
Identities = 58/62 (93%), Positives = 60/62 (96%), Gaps = 1/62 (1%)
Frame = +3
Query: 72 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 248
M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60
Query: 249 PI 254
PI
Sbjct: 61 PI 62
Score = 59.3 bits (137), Expect = 6e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 254 NENDTPTSLEMEEGDTIEVYQQQTGG 331
NENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 63 NENDTPTSLEMEEGDTIEVYQQQTGG 88
>AF053083-1|AAD19219.1| 90|Drosophila melanogaster ubiquitin-like
protein SMT3 protein.
Length = 90
Score = 123 bits (297), Expect = 2e-28
Identities = 58/62 (93%), Positives = 60/62 (96%), Gaps = 1/62 (1%)
Frame = +3
Query: 72 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 248
M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60
Query: 249 PI 254
PI
Sbjct: 61 PI 62
Score = 59.3 bits (137), Expect = 6e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 254 NENDTPTSLEMEEGDTIEVYQQQTGG 331
NENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 63 NENDTPTSLEMEEGDTIEVYQQQTGG 88
>AE014134-1209|AAF52470.1| 90|Drosophila melanogaster CG4494-PA
protein.
Length = 90
Score = 123 bits (297), Expect = 2e-28
Identities = 58/62 (93%), Positives = 60/62 (96%), Gaps = 1/62 (1%)
Frame = +3
Query: 72 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 248
M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60
Query: 249 PI 254
PI
Sbjct: 61 PI 62
Score = 59.3 bits (137), Expect = 6e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 254 NENDTPTSLEMEEGDTIEVYQQQTGG 331
NENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 63 NENDTPTSLEMEEGDTIEVYQQQTGG 88
>BT003801-1|AAO41484.1| 504|Drosophila melanogaster AT23571p
protein.
Length = 504
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 265 HSNIT*DGRGRHNRGLPTADRRSVPSV 345
HSNI +G G N+ LP RRS SV
Sbjct: 237 HSNINNNGHGSQNQMLPPQMRRSAASV 263
>AJ294538-1|CAC82378.1| 660|Drosophila melanogaster Lasp protein
protein.
Length = 660
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 265 HSNIT*DGRGRHNRGLPTADRRSVPSV 345
HSNI +G G N+ LP RRS SV
Sbjct: 393 HSNINNNGHGSQNQMLPPQMRRSAASV 419
>AE014296-2785|AAN11739.2| 657|Drosophila melanogaster CG3849-PB,
isoform B protein.
Length = 657
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 265 HSNIT*DGRGRHNRGLPTADRRSVPSV 345
HSNI +G G N+ LP RRS SV
Sbjct: 390 HSNINNNGHGSQNQMLPPQMRRSAASV 416
>AE014296-2784|AAF49426.3| 504|Drosophila melanogaster CG3849-PA,
isoform A protein.
Length = 504
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 265 HSNIT*DGRGRHNRGLPTADRRSVPSV 345
HSNI +G G N+ LP RRS SV
Sbjct: 237 HSNINNNGHGSQNQMLPPQMRRSAASV 263
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,988,764
Number of Sequences: 53049
Number of extensions: 638537
Number of successful extensions: 1208
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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