Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0826
         (836 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    43   0.008
UniRef50_P09397 Cluster: Streptomycin biosynthesis protein strF;...    34   5.1  

>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 43.2 bits (97), Expect = 0.008
 Identities = 19/27 (70%), Positives = 19/27 (70%)
 Frame = +1

Query: 70  MGDGNHSPSGGPYARLPTRPMNALAGL 150
           MGDGNHSPSG PYA LPTR    L  L
Sbjct: 1   MGDGNHSPSGRPYASLPTRAKMKLTSL 27


>UniRef50_P09397 Cluster: Streptomycin biosynthesis protein strF;
           n=5; Streptomyces|Rep: Streptomycin biosynthesis protein
           strF - Streptomyces griseus
          Length = 281

 Score = 33.9 bits (74), Expect = 5.1
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -1

Query: 224 YYTFKPEETLNRQIKQITLSAFPPKSPARAFIGRVGRRAYGPPDGE 87
           ++   P E L   ++++T+ A P +  AR    RVG R++   DGE
Sbjct: 210 FFDLSPAERLGNHLERLTIPAVPLRLAARRLAMRVGGRSHEVSDGE 255


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,805,313
Number of Sequences: 1657284
Number of extensions: 13817886
Number of successful extensions: 27244
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 26501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27238
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72963732758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)