Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0825
(776 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.004
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 37 0.021
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.26
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 32 0.60
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028) 32 0.60
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 1.4
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 30 1.8
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 30 2.4
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 29 5.5
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 9.7
SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_23569| Best HMM Match : PAN (HMM E-Value=0.0015) 28 9.7
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +3
Query: 555 CAGLVRAGGRDYDNTDLGAPAFFQNA----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 722
CAG R+G N D G P ++ L G VS+GK + Y V ++S+T+WI
Sbjct: 250 CAGEARSGASGGCNGDSGGPLVCEDNGRWYLHGAVSYGKLHCPTTYYTVFARVASYTDWI 309
Query: 723 LQ 728
Q
Sbjct: 310 KQ 311
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 36.7 bits (81), Expect = 0.021
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +3
Query: 471 QARTHCDQQRKLQEQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQN------- 629
QA+ + + Q DR+ T+N CAG+ R GG D D G P N
Sbjct: 368 QAKVPLVSRDQCSHQQSYGDRI-TENMLCAGM-RQGGVDSCQGDSGGPFVCTNPENPRQW 425
Query: 630 ALVGIVSFGKSNANDIYPVVLTSISSFTEWI 722
LVG+ S+GK A + + ++ + WI
Sbjct: 426 TLVGVTSWGKGCARALKYGIYANVRRYLHWI 456
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 33.5 bits (73), Expect = 0.20
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Frame = +3
Query: 555 CAGLVRAGGRDYDNTDLGAPAFFQNA----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 722
CAG R G N D G P + + L G VS+G Y V T +SS+ WI
Sbjct: 662 CAGEARVGAAGGCNGDSGGPLVCEQSGVWVLHGAVSYGARWCPTDYYTVFTRVSSYVAWI 721
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 4/92 (4%)
Frame = +3
Query: 459 RQPPQARTHCDQQRKLQEQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA-- 632
R P QA + +Y V + CAG R+ N D G P ++
Sbjct: 906 RHPQQAMLPIASHENCRRKYGD---VSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGS 962
Query: 633 --LVGIVSFGKSNANDIYPVVLTSISSFTEWI 722
L G VS+G + V ++S+T+WI
Sbjct: 963 WFLHGAVSYGMKYCPTTHYTVFARVASYTDWI 994
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 33.1 bits (72), Expect = 0.26
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 13/90 (14%)
Frame = +3
Query: 504 LQEQYKGH-DRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQN------------ALVGI 644
+Q K H D +VT N FCAG + D D G P N L+G+
Sbjct: 276 IQTCRKAHPDYIVTANMFCAGFENSSRGDACQGDSGGPFSVDNPLPATPKGQHRHVLLGV 335
Query: 645 VSFGKSNANDIYPVVLTSISSFTEWILQNV 734
+S+G V T + +F +WIL +
Sbjct: 336 ISWGDGCGKFGKYGVYTRLFNFIDWILNEI 365
Score = 29.9 bits (64), Expect = 2.4
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +1
Query: 274 HPEFSEENYDKDVSIVRVTHAIHF 345
HP +S ++YD D++++R+ + F
Sbjct: 199 HPHYSPDSYDSDIALIRLAQPVTF 222
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +3
Query: 555 CAGLVRAGGRDYDNTDLGAPAFFQNA----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 722
CAG R+ N D G P ++ L G VS+G N + V ++S+T+WI
Sbjct: 605 CAGEARSDAAGGCNGDSGGPLVCEDNGSWFLHGAVSYGLRNCPTTHYTVFARVASYTDWI 664
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Frame = +3
Query: 555 CAGLVRAGGRDYDNTDLGAPAFFQN----ALVGIVSFGKSNANDIYPVVLTSISSFTEWI 722
CAG + D G P + L G+VSFG N V T +S++ +WI
Sbjct: 115 CAGEAKPNAAGACQGDSGGPLVCERNGQWTLYGVVSFGAGNCEVTSYTVYTKVSNYLDWI 174
>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
Length = 333
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +2
Query: 83 EVFLPILNQW--FQQCAGIVLTNYHYLSTATCFH-GEFYDPAYRRIIAGSSRRSEPGEIS 253
E F+ + W QC+G ++ H ++ A C H G+++ I+ G S S E+
Sbjct: 138 EPFVSSVKLWSDVMQCSGTLIGPCHVITAAHCIHNGKWFVSPLTAILVGVSNTSSTDELD 197
Query: 254 LFTL 265
F +
Sbjct: 198 YFAV 201
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -3
Query: 618 RQGHPSQYCRSRGHQPGPNRR--RICYQSRRD 529
RQG P +YCRS Q GP RR R Y +R+
Sbjct: 338 RQGTPDEYCRSSVKQIGPFRRFERRGYSKKRN 369
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 639 LLAHFGRRQGHPSQYCRSRGHQPGPNRRRICYQSRRDHDPCTV 511
L+ H G R +PS+ C + P +++ YQS+ HD C +
Sbjct: 162 LICH-GCRGINPSKVCAACNGDFAPGEKKVGYQSKTFHDKCFI 203
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = +3
Query: 537 VTDNKFCAGLVRAGGRDYDNTDLGAPAFFQN----ALVGIVSFGKSNANDIYPVVLTSIS 704
V+ CA + G D D G P +N LVG+ S+G A+ YP + ++
Sbjct: 384 VSSTMLCA---QVPGIDTCQGDSGGPLVCENNNKWTLVGVTSWGYGCAHPDYPGIYAKLT 440
Query: 705 SFTEWILQNV 734
+W+ ++
Sbjct: 441 ELKDWVFHHM 450
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/81 (20%), Positives = 32/81 (39%)
Frame = +1
Query: 274 HPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGSV 453
H +FS + D++++++ + + GWG TV GGS
Sbjct: 110 HEQFSMRHLKNDIALLQLHEPVKASDKVNTVCLPSSGSRAQAGARCYITGWGRTVGGGSA 169
Query: 454 SDGNLHKLELIVTNKENCRNS 516
+ G L + L V +C+ +
Sbjct: 170 A-GILQQAMLPVAGDSDCQRT 189
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/80 (21%), Positives = 32/80 (40%)
Frame = +1
Query: 268 VNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGG 447
++H +S D D +++++T ++F + GWG+T G
Sbjct: 375 ISHANYSYNTVDYDYALLKLTRPLNF--TQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRG 432
Query: 448 SVSDGNLHKLELIVTNKENC 507
S S L ++ L + N C
Sbjct: 433 SPSPNYLQEVGLPLVNHSQC 452
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/80 (21%), Positives = 32/80 (40%)
Frame = +1
Query: 268 VNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGG 447
++H +S D D +++++T ++F + GWG+T G
Sbjct: 624 ISHANYSYNTVDYDYALLKLTRPLNF--TQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRG 681
Query: 448 SVSDGNLHKLELIVTNKENC 507
S S L ++ L + N C
Sbjct: 682 SPSPNYLQEVGLPLVNHSQC 701
>SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 677
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -3
Query: 684 RGRCHWHCSFQKIRCLLAHFGRRQGHPSQYCRSRGHQPGPNRRRICYQSRRDHDPCTVPA 505
R CH F+++ LLA F R+ HP + R H P R++C+ C A
Sbjct: 249 RQMCHPLAPFRQMCYLLAPFRRQMCHPLAHFRQMCHPLAP-FRQMCHPLAHFRQMCHPLA 307
Query: 504 VF 499
F
Sbjct: 308 PF 309
>SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 473
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 68 SLVQIEVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFY 190
+LV +E + P N+W ++ +LT Y STA G+ Y
Sbjct: 111 NLVSMERYDPSTNEWEEEAVAPMLTARKYFSTAV-LDGKLY 150
>SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -3
Query: 471 VEVAVRYTAALNGSSPSEQI-NKNTLGYYDTLLDNSTLLDVWAEVDGMCYSYDAHILVVI 295
+++ V Y AA+ S Q N+N L Y + D + A + M SY+ + +
Sbjct: 303 MKIKVNYVAAVQDESTYSQFYNENNLKYEEEFTDVLENIKTRARIVIMVTSYNMAVEGMH 362
Query: 294 LLREFGMVNSK 262
L + G++N +
Sbjct: 363 LAKNRGLINGE 373
>SB_23569| Best HMM Match : PAN (HMM E-Value=0.0015)
Length = 504
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = -2
Query: 259 EQRYFTGLTATGRSSDNATVCRIVEFSMETGSS*KVVVVGENNTSALLEPLIQD-G*EYF 83
E+ Y TGL T CR + F E+ K + + +L LIQD +YF
Sbjct: 31 EETYVTGLFTCAHLCTRNTECRSINFEKESLGEKKDGKLCQLLKDGILTKLIQDLNFDYF 90
Query: 82 NLDQAGMLAN 53
+++ + N
Sbjct: 91 SVENTRKVIN 100
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,374,211
Number of Sequences: 59808
Number of extensions: 627652
Number of successful extensions: 1456
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1451
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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