Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0824
         (514 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038615-4|AAB94143.1|  743|Caenorhabditis elegans Hypothetical ...    28   3.4  
AF002196-7|AAB53977.1|  254|Caenorhabditis elegans Hypothetical ...    27   6.0  
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U13071-2|AAL65793.1|  988|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>AF038615-4|AAB94143.1|  743|Caenorhabditis elegans Hypothetical
           protein R02D3.2 protein.
          Length = 743

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 192 DLVSRPVKSHHRTCHITHASCSSYNPENKQHNP 290
           ++VS PVK H  T  +T     ++ PE     P
Sbjct: 589 EMVSEPVKEHETTSELTKEQEPAFEPEKLHETP 621


>AF002196-7|AAB53977.1|  254|Caenorhabditis elegans Hypothetical
           protein C09D4.2 protein.
          Length = 254

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 354 VVTREIRINKLFWLKTGIETWRGCVAYFPDCSCCMK 247
           V T +  + K   L+TG     GC     +C+CC++
Sbjct: 115 VSTSKQVVRKELSLRTGSSNENGCACVHGNCACCLE 150


>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
           protein F07A11.6c protein.
          Length = 2392

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 234 HITHASCSSYNPENKQHNPATFRSQFSA 317
           H+  ASCS + P   +H+P  +R +F +
Sbjct: 256 HLLKASCSVHVPHLDRHSPDHYRRRFES 283


>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
           protein F07A11.6b protein.
          Length = 2407

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 234 HITHASCSSYNPENKQHNPATFRSQFSA 317
           H+  ASCS + P   +H+P  +R +F +
Sbjct: 271 HLLKASCSVHVPHLDRHSPDHYRRRFES 298


>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
           protein F07A11.6a protein.
          Length = 2211

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 234 HITHASCSSYNPENKQHNPATFRSQFSA 317
           H+  ASCS + P   +H+P  +R +F +
Sbjct: 271 HLLKASCSVHVPHLDRHSPDHYRRRFES 298


>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
           protein F07A11.6c protein.
          Length = 2392

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 234 HITHASCSSYNPENKQHNPATFRSQFSA 317
           H+  ASCS + P   +H+P  +R +F +
Sbjct: 256 HLLKASCSVHVPHLDRHSPDHYRRRFES 283


>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
           protein F07A11.6b protein.
          Length = 2407

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 234 HITHASCSSYNPENKQHNPATFRSQFSA 317
           H+  ASCS + P   +H+P  +R +F +
Sbjct: 271 HLLKASCSVHVPHLDRHSPDHYRRRFES 298


>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
           protein F07A11.6a protein.
          Length = 2211

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 234 HITHASCSSYNPENKQHNPATFRSQFSA 317
           H+  ASCS + P   +H+P  +R +F +
Sbjct: 271 HLLKASCSVHVPHLDRHSPDHYRRRFES 298


>U13071-2|AAL65793.1|  988|Caenorhabditis elegans Hypothetical protein
            T22F7.3 protein.
          Length = 988

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 249  SCSSYNPENKQHNPATFRSQFS 314
            +C  +NPENK   PATF  QF+
Sbjct: 945  ACDPFNPENK-GCPATFSCQFA 965


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,620,267
Number of Sequences: 27780
Number of extensions: 241931
Number of successful extensions: 638
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)