Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0822
(809 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 46 1e-06
DQ396551-1|ABD60146.1| 354|Anopheles gambiae adipokinetic hormo... 24 6.4
AY298745-1|AAQ63187.1| 354|Anopheles gambiae G-protein coupled ... 24 6.4
AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide recepto... 23 8.4
AJ304406-1|CAC35454.1| 131|Anopheles gambiae putative epidermal... 23 8.4
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 46.4 bits (105), Expect = 1e-06
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 565 KRSHKIRQDICPYCGKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASK 744
+R HK + C Y LK H HTGEK ++C C+ LT H + HT K
Sbjct: 209 ERPHKCTE--CDYASVELSKLKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGEK 266
Query: 745 DFKC-VSHSRLRH*RILEDH 801
+ C V +R L+ H
Sbjct: 267 PYSCDVCFARFTQSNSLKAH 286
Score = 46.0 bits (104), Expect = 1e-06
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 622 SLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKCVSHSR-LRH*RILED 798
S K HA H GEK Y+CE C +S L H HT K +KC ++ R ++L+
Sbjct: 341 SYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKR 400
Query: 799 HM 804
HM
Sbjct: 401 HM 402
Score = 43.6 bits (98), Expect = 7e-06
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +1
Query: 595 CPYCGKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKD--FKC 756
C Y L H +HTGEK Y C++C F S L HK H F+C
Sbjct: 245 CTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQC 300
Score = 42.7 bits (96), Expect = 1e-05
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +1
Query: 592 ICPYCGKITKSL---KAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKC 756
+C YC + L H H+ ++ +KC +C +GF + L H HT +K +C
Sbjct: 128 MCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRC 185
Score = 42.3 bits (95), Expect = 2e-05
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 592 ICPYCGKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYH-KKKHTASKDFKC 756
+C K SL+ H HTG K ++C+ C F +SG L H + +HT + KC
Sbjct: 159 VCERGFKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRHTHERPHKC 214
Score = 41.5 bits (93), Expect = 3e-05
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 583 RQDICPYCGKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYH 720
R + CPY + L++H L+HT +K YKC+ C++ F L H
Sbjct: 356 RCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRH 401
Score = 36.7 bits (81), Expect = 8e-04
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 592 ICPY-CGKITKSLKAHAL-VHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKC 756
+CP CG+ T L+ H +HT +K KC+ C F H K H K ++C
Sbjct: 302 LCPTTCGRKT-DLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRC 357
Score = 33.5 bits (73), Expect = 0.008
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +1
Query: 595 CPYCGKITKSLKAHALV-HTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKC 756
C C + L H HT E+ +KC C + L H + HT K F+C
Sbjct: 188 CDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQC 242
>DQ396551-1|ABD60146.1| 354|Anopheles gambiae adipokinetic hormone
receptor protein.
Length = 354
Score = 23.8 bits (49), Expect = 6.4
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 557 TSGSL-CSRTTFFKTFGLSVSCIFYI 483
T+G L C FF+TFGL +S I
Sbjct: 115 TAGDLMCRVMAFFRTFGLYLSSFILI 140
>AY298745-1|AAQ63187.1| 354|Anopheles gambiae G-protein coupled
receptor protein.
Length = 354
Score = 23.8 bits (49), Expect = 6.4
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 557 TSGSL-CSRTTFFKTFGLSVSCIFYI 483
T+G L C FF+TFGL +S I
Sbjct: 115 TAGDLMCRVMAFFRTFGLYLSSFILI 140
>AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide receptor
protein.
Length = 493
Score = 23.4 bits (48), Expect = 8.4
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 282 LFLVCIKSIKLLN*VHFFYRLIFQFVL 202
+FL+C ++N V FY LI ++++
Sbjct: 319 VFLLCNLPAMMINIVEAFYSLIIEYMV 345
>AJ304406-1|CAC35454.1| 131|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 131
Score = 23.4 bits (48), Expect = 8.4
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -2
Query: 748 NPLRRCVFSCGMLSLPKTKTLYYK 677
N +R C+ + G +S+P + +YK
Sbjct: 36 NEMRVCIGTNGRMSVPANREYHYK 59
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,797
Number of Sequences: 2352
Number of extensions: 15793
Number of successful extensions: 245
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -