Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0822
(809 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 43 3e-04
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 39 0.003
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 37 0.018
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 37 0.018
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 36 0.042
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 36 0.042
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 36 0.042
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 35 0.056
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 35 0.056
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 34 0.097
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 34 0.097
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 34 0.13
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 34 0.13
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 33 0.17
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 33 0.22
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 33 0.22
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 33 0.30
At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein ... 33 0.30
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 33 0.30
At4g16610.1 68417.m02512 zinc finger (C2H2 type) family protein ... 32 0.39
At3g05670.1 68416.m00631 PHD finger family protein contains Pfam... 31 0.90
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 31 0.90
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 31 0.90
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 31 1.2
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 31 1.2
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 30 1.6
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 30 2.1
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 30 2.1
At1g68360.1 68414.m07808 zinc finger protein-related similar to ... 30 2.1
At1g50770.1 68414.m05710 hypothetical protein 30 2.1
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 30 2.1
At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein ... 29 2.8
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 29 2.8
At1g76310.1 68414.m08864 cyclin, putative similar to B-like cycl... 29 2.8
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 29 2.8
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 29 2.8
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 29 2.8
At1g13400.1 68414.m01562 zinc finger (C2H2 type) family protein ... 29 2.8
At5g27880.1 68418.m03344 zinc finger (C2H2 type) family protein ... 29 3.7
At1g68480.1 68414.m07823 zinc finger (C2H2 type) family protein ... 29 3.7
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 29 4.8
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 29 4.8
At4g25800.1 68417.m03712 calmodulin-binding protein similar to c... 29 4.8
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 29 4.8
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 29 4.8
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 28 6.4
At2g16490.1 68415.m01891 XH domain-containing protein contains P... 28 8.4
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 28 8.4
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Frame = +1
Query: 547 DPDVVKKRSH--KIRQDICPY--CGKI---TKSLKAHALVHTGEKKYKC--EICSKGFLS 699
D ++K SH RQ +C CGK + LK H L+HTGE+ Y C E C K F
Sbjct: 92 DVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSL 151
Query: 700 SGGLTYHKKKHTASKDFKC 756
L H K H+ C
Sbjct: 152 DFNLRSHMKTHSQENYHIC 170
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Frame = +1
Query: 541 QSDPDVVKKRSHKIRQDICPY------CGKITKSLKAHALVHTGEKKYKCEICSKGFLSS 702
+S+ DVV+K+ + + C + G +T +K H GEKK+KCE CSK +
Sbjct: 123 RSNKDVVRKKVYVCPEPGCVHHHPSRALGDLT-GIKKHFFRKHGEKKWKCEKCSKKYAVQ 181
Query: 703 GGLTYHKKKHTASKDFKC 756
H K +K++KC
Sbjct: 182 SDWKAHAKT-CGTKEYKC 198
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 661 KYKCEICSKGFLSSGGLTYHKKKH 732
++ CE+C+KGF L HK+ H
Sbjct: 91 RFICEVCNKGFQRDQNLQLHKRGH 114
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 36.7 bits (81), Expect = 0.018
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 619 KSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKCVSHSRLRH*RILED 798
++L+ H G K + C +C K F G H+K K + C S +H R L+D
Sbjct: 247 RTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEK--NCGKLWYCSCGSDFKHKRSLKD 304
Query: 799 HM 804
H+
Sbjct: 305 HV 306
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 36.7 bits (81), Expect = 0.018
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 619 KSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKCVSHSRLRH*RILED 798
++L+ H G K + C +C K G H+K K + CV S +H R L+D
Sbjct: 214 RTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEK--NCGKRWVCVCGSDFKHKRSLKD 271
Query: 799 HM 804
H+
Sbjct: 272 HV 273
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 35.5 bits (78), Expect = 0.042
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 607 GKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKC 756
G +T +K H GEKK+KCE CSK + H K +K++KC
Sbjct: 119 GDLT-GIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAH-SKICGTKEYKC 166
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 661 KYKCEICSKGFLSSGGLTYHKKKH 732
++ CEIC+KGF L H++ H
Sbjct: 60 RFVCEICNKGFQRDQNLQLHRRGH 83
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 35.5 bits (78), Expect = 0.042
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 619 KSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKCVSHSRLRH*RILED 798
++L+ H G K + C C K F G H+K K + C+ S +H R L+D
Sbjct: 286 RTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEK--NCGKLWYCICGSDFKHKRSLKD 343
Query: 799 HM 804
H+
Sbjct: 344 HI 345
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 35.5 bits (78), Expect = 0.042
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Frame = +1
Query: 541 QSDPDVVKKRSHKIRQDICPY------CGKITKSLKAHALVHTGEKKYKCEICSKGFLSS 702
+S+ +V++K+ + + C + G +T +K H GEKK+KC+ CSK +
Sbjct: 130 RSNKEVIRKKVYVCPEASCVHHDPSRALGDLT-GIKKHFCRKHGEKKWKCDKCSKKYAVQ 188
Query: 703 GGLTYHKKKHTASKDFKC 756
H K +K+++C
Sbjct: 189 SDCKAHSKT-CGTKEYRC 205
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 661 KYKCEICSKGFLSSGGLTYHKKKH 732
++ CEIC+KGF L H++ H
Sbjct: 98 RFVCEICNKGFQRDQNLQLHRRGH 121
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 35.1 bits (77), Expect = 0.056
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 580 IRQDICPYCGKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKC 756
+ D G +T K ++ H GEKK+KCE CSK + H K ++++KC
Sbjct: 132 VHHDASRALGDLTGIKKHYSRKH-GEKKWKCEKCSKKYAVQSDWKAHAKT-CGTREYKC 188
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 661 KYKCEICSKGFLSSGGLTYHKKKH 732
++ CEIC+KGF L H++ H
Sbjct: 81 RFVCEICNKGFQRDQNLQLHRRGH 104
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 35.1 bits (77), Expect = 0.056
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 607 GKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKC 756
G +T +K H GEKK+KCE CSK + H K +K+++C
Sbjct: 141 GDLT-GIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKT-CGTKEYRC 188
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 34.3 bits (75), Expect = 0.097
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 607 GKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKC 756
G +T +K H GEKK+KC+ CSK + H K +K++KC
Sbjct: 121 GDLT-GIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAH-SKICGTKEYKC 168
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 661 KYKCEICSKGFLSSGGLTYHKKKH 732
++ CEIC+KGF L H++ H
Sbjct: 62 RFVCEICNKGFQRDQNLQLHRRGH 85
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 34.3 bits (75), Expect = 0.097
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 580 IRQDICPYCGKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKC 756
+ D G +T +K H GEKK+KC+ CSK + H K +K+++C
Sbjct: 131 VHHDPARALGDLT-GIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTKEYRC 187
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 661 KYKCEICSKGFLSSGGLTYHKKKHTASKDFKCVSHSRLR 777
++ CE+C+KGF L H++ H K S+ +R
Sbjct: 81 RFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEVR 119
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 607 GKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKC 756
G +T +K H GEKK+KCE CSK + H K ++D++C
Sbjct: 141 GDLT-GIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAH-TKICGTRDYRC 188
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 661 KYKCEICSKGFLSSGGLTYHKKKH 732
++ CEIC+KGF L H++ H
Sbjct: 81 RFVCEICNKGFQRDQNLQLHRRGH 104
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 607 GKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKC 756
G +T +K H GEKK+KC+ CSK + H K +K+++C
Sbjct: 139 GDLT-GIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTKEYRC 186
Score = 28.7 bits (61), Expect = 4.8
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 661 KYKCEICSKGFLSSGGLTYHKKKH 732
++ CE+C+KGF L H++ H
Sbjct: 80 RFICEVCNKGFQREQNLQLHRRGH 103
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +1
Query: 580 IRQDICPYCGKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKC 756
+ D G +T +K H GEKK+KC+ CSK + H K S++F+C
Sbjct: 56 VHHDPARALGDLT-GIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAH-NKICGSREFRC 112
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 661 KYKCEICSKGFLSSGGLTYHKKKH 732
++ CEIC+KGF L HK+ H
Sbjct: 5 RFFCEICNKGFQREQNLQLHKRGH 28
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +1
Query: 619 KSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKCVSHSRLRH*RILED 798
++L+ H G + + C C K F G H+K K + C S +H R L+D
Sbjct: 325 RTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEK--NCGKLWYCSCGSDFKHKRSLKD 382
Query: 799 HM 804
H+
Sbjct: 383 HV 384
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +1
Query: 619 KSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKCVSHSRLRH*RILED 798
++L+ H G K + C C K G H+K K + C S +H R L+D
Sbjct: 250 RTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEK--NCGKLWYCTCGSDFKHKRSLKD 307
Query: 799 HM 804
H+
Sbjct: 308 HI 309
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = +1
Query: 508 KPKVLKNVVLLQSDPDVVKKRSHKIRQDICPYCGKITKSLKAHALVHTGEKKYKCEICSK 687
K +++++ V++ +K I D+ CGK + + A +H G ++ C ICSK
Sbjct: 130 KREIIEDGVVMMKKRRKMKFDEEIIDSDV-EVCGK-RFWIPSPAQIHVGPMQFACSICSK 187
Query: 688 GFLSSGGLTYHKKKH 732
F + H H
Sbjct: 188 TFNRYNNMQMHMWGH 202
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 580 IRQDICPYCGKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKC 756
+ D G +T +K H GEKK+KC+ CSK + H K +K+++C
Sbjct: 118 VHHDPARALGDLT-GIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAH-SKICGTKEYRC 174
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 622 SLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKH 732
+L ++L+ T ++ CE+C+KGF L H++ H
Sbjct: 56 ALSPNSLMTTN--RFICEVCNKGFKRDQNLQLHRRGH 90
>At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein
contains Pfam domian PF00096: Zinc finger, C2H2 type
Length = 302
Score = 32.7 bits (71), Expect = 0.30
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 619 KSLKAHALVHTGEKKYKC-EICSKGFLSSGGLTYHKKKHTASKDFKCVSHSRLRH*RILE 795
++L+ H G K ++C + C K F G H+K K + CV S +H R L+
Sbjct: 171 RTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKN--CGKLWFCVCGSDFKHKRSLK 228
Query: 796 DHM 804
DH+
Sbjct: 229 DHV 231
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 607 GKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKC 756
G +T +K H GEKK+KCE C+K + H K +++++C
Sbjct: 128 GDLT-GIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKT-CGTREYRC 175
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 661 KYKCEICSKGFLSSGGLTYHKKKH 732
++ CEIC KGF L H++ H
Sbjct: 69 RFLCEICGKGFQRDQNLQLHRRGH 92
>At4g16610.1 68417.m02512 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 655 EKKYKCEICSKGFLSSGGLTYHKKKHTAS 741
+ K+KC++CSK F + L H K H S
Sbjct: 2 QNKHKCKLCSKSFCNGRALGGHMKSHLVS 30
>At3g05670.1 68416.m00631 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 883
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 323 HDVEK--DFDALDQRNEDSGAEDFHSDTDIVNESEKPLKLEKHKKGILK 463
H+ EK D D D+ +D G EDF +D D+ + E+ ++ K LK
Sbjct: 210 HETEKEDDGDYEDEDEDDDGDEDFTADEDVSLDEEEEEEIIACNKNALK 258
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 31.1 bits (67), Expect = 0.90
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 661 KYKCEICSKGFLSSGGLTYHKKKH 732
+Y CEIC++GF L H+++H
Sbjct: 69 RYVCEICNQGFQRDQNLQMHRRRH 92
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 31.1 bits (67), Expect = 0.90
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 661 KYKCEICSKGFLSSGGLTYHKKKH 732
+Y CEIC++GF L H+++H
Sbjct: 38 RYVCEICNQGFQRDQNLQMHRRRH 61
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +1
Query: 580 IRQDICPYCGKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKK 726
+ D C G + K H+ K++ CE CSKG+ H K
Sbjct: 90 LHHDPCHALGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLK 138
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 655 EKKYKCEICSKGFLSSGGLTYHKKKH 732
+K YKC +C K F S L HK H
Sbjct: 91 QKDYKCSVCGKSFPSYQALGGHKTSH 116
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +1
Query: 565 KRSHK--IRQDICPYCGKITKSLK-AHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKH 732
K SH+ + D+ G +T + ++ LV K + C IC K F S L HK+ H
Sbjct: 113 KTSHRKPVSVDVNNSNGTVTNNGNISNGLVGQSGKTHNCSICFKSFPSGQALGGHKRCH 171
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 661 KYKCEICSKGFLSSGGLTYHKKKH 732
+Y CEIC++GF L H+++H
Sbjct: 66 RYICEICNQGFQRDQNLQMHRRRH 89
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Frame = +1
Query: 535 LLQSDPDV-VKKRSHKIRQDICPY---C---GKITKSLKAHALVHTGEKKYKCEICSKGF 693
LL+ D ++ VKKR + + C + C G + K H+ K++ CE CSKG+
Sbjct: 95 LLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGY 154
Query: 694 LSSGGLTYHKK 726
H K
Sbjct: 155 AVQSDYKAHLK 165
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 607 GKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKC 756
G +T +K H GEKK+ CE C+K + H K +++++C
Sbjct: 124 GDLT-GIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKT-CGTREYRC 171
Score = 28.7 bits (61), Expect = 4.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 661 KYKCEICSKGFLSSGGLTYHKKKH 732
++ CE+C KGF L H++ H
Sbjct: 65 RFLCEVCGKGFQRDQNLQLHRRGH 88
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 21/78 (26%)
Frame = +1
Query: 562 KKRSHKIRQDICPYCGKITKSLKA---HALVHT------------GE------KKYKCEI 678
+KR K + C CGK+ +S +A H H GE ++Y+C+I
Sbjct: 219 RKRGKKQSKYTCDTCGKVLRSYQALGGHRTSHKYKRLKISDKNYFGEDGPIVRRQYECQI 278
Query: 679 CSKGFLSSGGLTYHKKKH 732
C++ F S L HKK H
Sbjct: 279 CNRMFASGQALGGHKKIH 296
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 601 YCGKITKSLKAHALVHTGEKKY-KCEICSKGFLSSGGLTYHKKKH 732
+ G + +L++ T K C+IC K F+ S GL HK+ H
Sbjct: 176 HSGALPSTLRSKLQTKTQWKSSCHCKICGKSFVCSQGLGNHKRVH 220
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 664 YKCEICSKGFLSSGGLTYHKKKH 732
YKC IC K F+ S L H++ H
Sbjct: 445 YKCSICEKSFVCSQALGSHQRLH 467
>At1g68360.1 68414.m07808 zinc finger protein-related similar to
zinc finger protein GI:790683 from [Arabidopsis
thaliana]
Length = 244
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 652 GEKKYKCEICSKGFLSSGGLTYHKKKH 732
GE+KY+C+ C + F +S L H+ H
Sbjct: 69 GERKYECQYCCREFGNSQALGGHQNAH 95
>At1g50770.1 68414.m05710 hypothetical protein
Length = 632
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 392 SDTDIVNESEKPLKLEKHKKGILKHEKVEIEYKIC 496
S+ D++N+ K K H+ GI+ EK + K+C
Sbjct: 330 SNADMINDGSKQPKCLLHEDGIIAGEKASSDEKLC 364
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +1
Query: 562 KKRSHKIRQDICPYCGKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYH 720
KK+ + C YC + K + H K +KC +C K ++ G+ H
Sbjct: 3 KKKKRATEKVWCYYCDREFDDEKI-LVQHQKAKHFKCHVCHKKLSTASGMVIH 54
>At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 238
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 664 YKCEICSKGFLSSGGLTYHKKKHTAS 741
YKC +C K F S L HK H S
Sbjct: 89 YKCSVCDKAFSSYQALGGHKASHRKS 114
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 658 KKYKCEICSKGFLSSGGLTYHKKKHTASKDFKCVSHS 768
K + C IC K F + L HK+ H K+ VS S
Sbjct: 146 KSHVCSICHKSFATGQALGGHKRCHYEGKNGGGVSSS 182
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +1
Query: 562 KKRSHKIRQDICPYCGKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTAS 741
KK+ ++ +D + + KS K+ ++KCE C K F S L H+ H +
Sbjct: 167 KKKKQRVEEDETDHDSEDYKSSKSRG-------RFKCETCGKVFKSYQALGGHRASHKKN 219
Query: 742 K 744
K
Sbjct: 220 K 220
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 604 CGKITKSLKAHALVHTGEKK-YKCEICSKGFLSSGGLTYHKKKH 732
C T+ ++ ++ EKK ++C IC + F S L HK+ H
Sbjct: 222 CMTKTEQVETEYVLGVKEKKVHECPICFRVFTSGQALGGHKRSH 265
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 658 KKYKCEICSKGFLSSGGLTYHKKKH 732
++YKC C K F++ L H + H
Sbjct: 2 ERYKCRFCFKSFINGRALGGHMRSH 26
>At1g76310.1 68414.m08864 cyclin, putative similar to B-like cyclin
GI:780267 from (Medicago sativa); contains Pfam profiles
PF00134: Cyclin, N-terminal domain, PF02984: Cyclin,
C-terminal domain
Length = 431
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Frame = +3
Query: 84 LSEAASRTYNFKLFIKHSHDLLNERNLLKRIYFSDLNDI--KVQTGILD----DKRNVLN 245
+++ +N +F++H+ +L E + ++ I D NDI +V+ ++D DK N L+
Sbjct: 114 ITDVEEGDFNEPMFVQHTEAMLEEIDKMEGIEMQDSNDIDAEVEESVMDIDSCDKNNPLS 173
Query: 246 SI 251
+
Sbjct: 174 VV 175
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 9/80 (11%)
Frame = +1
Query: 544 SDPDVVKKRSHKIRQDI-CPYCGK--ITKSLKAHALVHT-----GEKKYKCEICSKGFLS 699
++ + +K Q I C CG + K++K H H GE K + E CS F
Sbjct: 259 TNEECLKSHIRSCHQHINCEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSK 318
Query: 700 SGGLTYHKKK-HTASKDFKC 756
+ L H K H + F C
Sbjct: 319 ASNLQKHMKAVHDDIRPFVC 338
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 9/80 (11%)
Frame = +1
Query: 544 SDPDVVKKRSHKIRQDI-CPYCGK--ITKSLKAHALVHT-----GEKKYKCEICSKGFLS 699
++ + +K Q I C CG + K++K H H GE K + E CS F
Sbjct: 171 TNEECLKSHIRSCHQHINCEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSK 230
Query: 700 SGGLTYHKKK-HTASKDFKC 756
+ L H K H + F C
Sbjct: 231 ASNLQKHMKAVHDDIRPFVC 250
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 616 TKSLKAHALVHTGE-KKYKCEICSKGFLSSGGLTYHKKKH 732
T S + V TG K + C IC+K F S L HK+ H
Sbjct: 119 TSSATTTSAVTTGSGKSHVCTICNKSFPSGQALGGHKRCH 158
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 664 YKCEICSKGFLSSGGLTYHKKKH 732
YKC +C K F S L HK H
Sbjct: 80 YKCSVCDKTFSSYQALGGHKASH 102
>At1g13400.1 68414.m01562 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 240
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 658 KKYKCEICSKGFLSSGGLTYHKKKHTASKDFKCVSHSR 771
K+Y+C CS F S L H +H ++ + ++ +R
Sbjct: 81 KEYECRFCSLKFFKSQALGGHMNRHRQERETESLNKAR 118
>At5g27880.1 68418.m03344 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 278
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 658 KKYKCEICSKGFLSSGGLTYHKKKHTASKDF 750
K Y C C KGF +S L H+ H +++
Sbjct: 78 KIYTCHFCKKGFSTSQALGGHQNAHKQEREW 108
>At1g68480.1 68414.m07823 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 253
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/83 (24%), Positives = 35/83 (42%)
Frame = +1
Query: 523 KNVVLLQSDPDVVKKRSHKIRQDICPYCGKITKSLKAHALVHTGEKKYKCEICSKGFLSS 702
+N + L + PD K +K + G+ K +G K Y+C CS F S
Sbjct: 5 ENYLDLNNLPDDFSKDGNKQALEEGSSSGQRKKKGSKEGKDESG-KVYECRFCSLKFCKS 63
Query: 703 GGLTYHKKKHTASKDFKCVSHSR 771
L H +H ++ + ++ +R
Sbjct: 64 QALGGHMNRHRQERETETLNQAR 86
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 658 KKYKCEICSKGFLSSGGLTYHKKKH 732
+ YKC +C K F S L HK H
Sbjct: 95 RDYKCTVCGKSFSSYQALGGHKTSH 119
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 389 HSDTDIVNESEKPLKLEKHKK-GILKHEKVEIEY 487
H + ++ NE+EKP K +K K+ G K ++ E E+
Sbjct: 828 HDEEEVPNETEKPEKKKKKKREGKSKKKETETEF 861
>At4g25800.1 68417.m03712 calmodulin-binding protein similar to
calmodulin-binding protein TCB60 GI:1698548 from
[Nicotiana tabacum]
Length = 601
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 293 YNDILIRKLCHDVEKDFDALDQRNEDSGAEDFHSDTDIVNESEKPLKL 436
YN L L H+ + FD + Q+++ G + + T+I NE+ L L
Sbjct: 419 YNQTLTTALPHNPQAQFDFVPQQDQFIGIQQPQTQTNIENENVTRLVL 466
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 649 TGEKKYKCEICSKGFLSSGGLTYHKKKHTASK 744
T + +YKCE C K F S L H+ H ++
Sbjct: 168 TTKGRYKCETCGKVFKSYQALGGHRASHKKNR 199
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 658 KKYKCEICSKGFLSSGGLTYHKKKHTAS 741
+ YKC +C K F++ L H + H ++
Sbjct: 2 ESYKCRVCFKSFVNGKALGGHMRSHMSN 29
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 619 KSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTAS 741
K +K + + G +KC ICS+ F + L H ++H +S
Sbjct: 79 KDVKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHRSS 119
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 664 YKCEICSKGFLSSGGLTYHKKKH 732
YKC +C K F S L HK H
Sbjct: 106 YKCNVCEKAFPSYQALGGHKASH 128
>At2g16490.1 68415.m01891 XH domain-containing protein contains Pfam
PF03469: XH domain
Length = 179
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 389 HSDTDIVNESEKPLKLEKHKKGILKHEKVEIEYK 490
H +D+VNE +PLK K K G H ++I K
Sbjct: 70 HFKSDLVNEEYEPLKKLKEKWGEDVHNTLKITIK 103
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 664 YKCEICSKGFLSSGGLTYHKKKHTASKD 747
++C IC+K F S L HK+ H ++ +
Sbjct: 209 HECPICAKVFTSGQALGGHKRSHASANN 236
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,446,306
Number of Sequences: 28952
Number of extensions: 340116
Number of successful extensions: 1167
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1843581600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -