Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0821
(797 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 88 1e-17
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 88 1e-17
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 88 1e-17
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 88 1e-17
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 88 1e-17
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 45 1e-04
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 45 1e-04
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 42 7e-04
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 42 7e-04
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 42 7e-04
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 88.2 bits (209), Expect = 1e-17
Identities = 39/49 (79%), Positives = 45/49 (91%)
Frame = +3
Query: 111 EEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRR 257
+++ LVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV R+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRK 202
Score = 78.2 bits (184), Expect = 1e-14
Identities = 31/45 (68%), Positives = 42/45 (93%)
Frame = +2
Query: 269 LALTNVESGDRASFSKVVEAIKTNFNERYEELRKHWGGGVLGNKS 403
LALT V++ D+A+F KV+EA+KTNFNER+EE+R+HWGGG+LG+KS
Sbjct: 207 LALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKS 251
Score = 33.9 bits (74), Expect = 0.26
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1
Query: 61 RPNTIRSGTNTVTKLVEKKKA 123
+P+ + +GTNTVTKL+E+KKA
Sbjct: 137 KPSYVSAGTNTVTKLIEQKKA 157
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 88.2 bits (209), Expect = 1e-17
Identities = 39/49 (79%), Positives = 45/49 (91%)
Frame = +3
Query: 111 EEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRR 257
+++ LVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV R+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRK 202
Score = 78.2 bits (184), Expect = 1e-14
Identities = 31/45 (68%), Positives = 42/45 (93%)
Frame = +2
Query: 269 LALTNVESGDRASFSKVVEAIKTNFNERYEELRKHWGGGVLGNKS 403
LALT V++ D+A+F KV+EA+KTNFNER+EE+R+HWGGG+LG+KS
Sbjct: 207 LALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKS 251
Score = 33.9 bits (74), Expect = 0.26
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1
Query: 61 RPNTIRSGTNTVTKLVEKKKA 123
+P+ + +GTNTVTKL+E+KKA
Sbjct: 137 KPSYVSAGTNTVTKLIEQKKA 157
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 88.2 bits (209), Expect = 1e-17
Identities = 39/49 (79%), Positives = 45/49 (91%)
Frame = +3
Query: 111 EEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRR 257
+++ LVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV R+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRK 202
Score = 78.2 bits (184), Expect = 1e-14
Identities = 31/45 (68%), Positives = 42/45 (93%)
Frame = +2
Query: 269 LALTNVESGDRASFSKVVEAIKTNFNERYEELRKHWGGGVLGNKS 403
LALT V++ D+A+F KV+EA+KTNFNER+EE+R+HWGGG+LG+KS
Sbjct: 207 LALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKS 251
Score = 33.9 bits (74), Expect = 0.26
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1
Query: 61 RPNTIRSGTNTVTKLVEKKKA 123
+P+ + +GTNTVTKL+E+KKA
Sbjct: 137 KPSYVSAGTNTVTKLIEQKKA 157
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 88.2 bits (209), Expect = 1e-17
Identities = 39/49 (79%), Positives = 45/49 (91%)
Frame = +3
Query: 111 EEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRR 257
+++ LVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV R+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRK 202
Score = 78.2 bits (184), Expect = 1e-14
Identities = 31/45 (68%), Positives = 42/45 (93%)
Frame = +2
Query: 269 LALTNVESGDRASFSKVVEAIKTNFNERYEELRKHWGGGVLGNKS 403
LALT V++ D+A+F KV+EA+KTNFNER+EE+R+HWGGG+LG+KS
Sbjct: 207 LALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKS 251
Score = 33.9 bits (74), Expect = 0.26
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1
Query: 61 RPNTIRSGTNTVTKLVEKKKA 123
+P+ + +GTNTVTKL+E+KKA
Sbjct: 137 KPSYVSAGTNTVTKLIEQKKA 157
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 88.2 bits (209), Expect = 1e-17
Identities = 39/49 (79%), Positives = 45/49 (91%)
Frame = +3
Query: 111 EEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRR 257
+++ LVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV R+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRK 202
Score = 78.2 bits (184), Expect = 1e-14
Identities = 31/45 (68%), Positives = 42/45 (93%)
Frame = +2
Query: 269 LALTNVESGDRASFSKVVEAIKTNFNERYEELRKHWGGGVLGNKS 403
LALT V++ D+A+F KV+EA+KTNFNER+EE+R+HWGGG+LG+KS
Sbjct: 207 LALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKS 251
Score = 33.9 bits (74), Expect = 0.26
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1
Query: 61 RPNTIRSGTNTVTKLVEKKKA 123
+P+ + +GTNTVTKL+E+KKA
Sbjct: 137 KPSYVSAGTNTVTKLIEQKKA 157
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 45.2 bits (102), Expect = 1e-04
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +3
Query: 126 LVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 239
+VV+A D +PIE++L LP LC VPY V+ K LG
Sbjct: 52 IVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALG 89
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 45.2 bits (102), Expect = 1e-04
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +3
Query: 126 LVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 239
+VV+A D +PIE++L LP LC VPY V+ K LG
Sbjct: 52 IVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALG 89
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 42.3 bits (95), Expect = 7e-04
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +3
Query: 108 REEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGA 242
R+ E + + A DV P++++ LPA+C + G+PY ++ LGA
Sbjct: 79 RKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGA 123
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 42.3 bits (95), Expect = 7e-04
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +3
Query: 108 REEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGA 242
R+ E + + A DV P++++ LPA+C + G+PY ++ LGA
Sbjct: 79 RKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGA 123
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 42.3 bits (95), Expect = 7e-04
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +3
Query: 108 REEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGA 242
R+ E + + A DV P++++ LPA+C + G+PY ++ LGA
Sbjct: 79 RKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGA 123
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,876,884
Number of Sequences: 53049
Number of extensions: 531619
Number of successful extensions: 1923
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1918
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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