Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0820
(815 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22930-2|CAA80514.1| 274|Anopheles gambiae trypsin-related prot... 49 1e-07
AJ271117-1|CAB88872.1| 355|Anopheles gambiae serine protease pr... 48 3e-07
Z22930-4|CAA80516.1| 267|Anopheles gambiae Trypsinogen precurso... 48 5e-07
Z22930-3|CAA80515.1| 275|Anopheles gambiae trypsin protein. 44 7e-06
Z49815-1|CAA89969.1| 237|Anopheles gambiae serine proteinase pr... 43 1e-05
Z22930-7|CAA80512.1| 274|Anopheles gambiae trypsin protein. 43 1e-05
Z18889-1|CAA79327.1| 274|Anopheles gambiae trypsin protein. 43 1e-05
Z22930-6|CAA80518.1| 277|Anopheles gambiae trypsin protein. 43 1e-05
Z18890-1|CAA79328.1| 277|Anopheles gambiae trypsin protein. 43 1e-05
Z22930-5|CAA80517.1| 275|Anopheles gambiae trypsin protein. 42 2e-05
Z22930-1|CAA80513.1| 273|Anopheles gambiae trypsin-related prot... 41 5e-05
Z32645-2|CAA83568.1| 259|Anopheles gambiae chymotrypsin-like pr... 36 0.002
Z18887-1|CAA79325.1| 259|Anopheles gambiae chymotrypsin 1 protein. 36 0.002
Z49833-1|CAA89994.1| 250|Anopheles gambiae serine proteinase pr... 33 0.008
Z49813-1|CAA89967.1| 247|Anopheles gambiae serine proteinase pr... 33 0.011
Z32645-1|CAA83567.1| 258|Anopheles gambiae chymotrypsinogen-lik... 33 0.014
Z18888-1|CAA79326.1| 258|Anopheles gambiae chymotrypsin 2 protein. 32 0.018
AF117748-1|AAD38334.1| 365|Anopheles gambiae serine protease 14... 31 0.032
DQ974163-1|ABJ52803.1| 595|Anopheles gambiae serpin 4B protein. 25 3.7
AF045250-1|AAC02700.1| 259|Anopheles gambiae serine proteinase ... 24 4.9
DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 24 6.4
AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform ... 24 6.4
AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform ... 24 6.4
U21917-1|AAA73920.1| 271|Anopheles gambiae serine protease prot... 23 8.5
AJ459779-1|CAD30839.1| 405|Anopheles gambiae clip-domain serine... 23 8.5
>Z22930-2|CAA80514.1| 274|Anopheles gambiae trypsin-related
protease protein.
Length = 274
Score = 49.2 bits (112), Expect = 1e-07
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = +1
Query: 538 NKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNALVGIVSFGKSNAN 717
N++ C + Y+ +TD FCAG + GG+D D G P + L+G++S+G A
Sbjct: 193 NQQECNKAYQSRYGGITDEMFCAGY-KQGGQDTCRQDSGGPFVAEGKLIGVISWGHECAL 251
Query: 718 DIYPVVLTSISS 753
YP V ++S
Sbjct: 252 AGYPGVYPRVAS 263
Score = 23.8 bits (49), Expect = 6.4
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 248 PSLIAGSSRRSEPGEISYVHFAVNHPEFSEENYDKDVSIVRVTHAIHF 391
P++ GSS + G + V V HP +N + D++++ + + + F
Sbjct: 98 PTVRVGSSEHASGGTVVRVARIVPHPMHGSKN-NYDIALLELKNELTF 144
>AJ271117-1|CAB88872.1| 355|Anopheles gambiae serine protease
protein.
Length = 355
Score = 48.0 bits (109), Expect = 3e-07
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Frame = +1
Query: 421 PTRCRNTPGYFC*SARMGNYRSRRQCI*RHLHKLELIVTNKENCREQYKGHDRVVTDNKF 600
P R RN G +A G S R L K+EL V + CR+ Y+G + + ++
Sbjct: 234 PQRSRNRVGTVSFAAGWGKTESASASE-RKL-KVELTVQDPSRCRQIYRGINIALKASQM 291
Query: 601 CAGLVRAGGRDYDNTDLGAPAFFQNA----LVGIVSFGKSNANDI-YPVVLTSISSFTE 762
CAG ++ G+D D G P ++A L+G+VSFG S YP V T++ + +
Sbjct: 292 CAGGLQ--GKDTCTGDSGGPLMAKSAGAWYLIGVVSFGLSKCGTAGYPGVYTNVVEYLD 348
>Z22930-4|CAA80516.1| 267|Anopheles gambiae Trypsinogen precursor
of ANTRYP7 protein.
Length = 267
Score = 47.6 bits (108), Expect = 5e-07
Identities = 26/71 (36%), Positives = 37/71 (52%)
Frame = +1
Query: 538 NKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNALVGIVSFGKSNAN 717
++E CRE Y H+ +TD CAG + GG+D D G P L+G+VS+G A
Sbjct: 188 DQEECREAYS-HE-AITDRMLCAGY-QQGGKDACQGDSGGPLVADGKLIGVVSWGAGCAQ 244
Query: 718 DIYPVVLTSIS 750
YP V ++
Sbjct: 245 PGYPGVYARVA 255
Score = 28.7 bits (61), Expect = 0.23
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 263 GSSRRSEPGEISYVHFAVNHPEFSEENYDKDVSIVRVTHAIHF 391
GSSR + G + V V HP + + D D +++ + + F
Sbjct: 97 GSSRHASSGTVVNVARIVEHPNYDDSTIDYDYALLELESELTF 139
>Z22930-3|CAA80515.1| 275|Anopheles gambiae trypsin protein.
Length = 275
Score = 43.6 bits (98), Expect = 7e-06
Identities = 22/71 (30%), Positives = 37/71 (52%)
Frame = +1
Query: 538 NKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNALVGIVSFGKSNAN 717
N++ C + Y + + T+ CAG + GG+D D G P ++ L+G+VS+G A
Sbjct: 195 NQDECNQAYHKSEGI-TERMLCAGY-QQGGKDACQGDSGGPLVAEDKLIGVVSWGAGCAQ 252
Query: 718 DIYPVVLTSIS 750
YP V ++
Sbjct: 253 PGYPGVYARVA 263
Score = 34.7 bits (76), Expect = 0.003
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 263 GSSRRSEPGEISYVHFAVNHPEFSEENYDKDVSIVRVTHAIHF 391
GSSR + G + +V V HP++ +E D D S++ + + F
Sbjct: 104 GSSRHASGGSVIHVARIVQHPDYDQETIDYDYSLLELESVLTF 146
>Z49815-1|CAA89969.1| 237|Anopheles gambiae serine proteinase
protein.
Length = 237
Score = 43.2 bits (97), Expect = 1e-05
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Frame = +1
Query: 529 IVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA----LVGIVS 696
I++N + CR+ R+ TDN CAG GGRD D G P ++ LVGIVS
Sbjct: 142 IISNMQ-CRKSSYRASRI-TDNMLCAGYTE-GGRDACQGDSGGPLNVGDSNFRELVGIVS 198
Query: 697 FGKSNANDIYPVVLTSISSF 756
+G+ A YP V T ++ +
Sbjct: 199 WGEGCARPNYPGVYTRVTRY 218
>Z22930-7|CAA80512.1| 274|Anopheles gambiae trypsin protein.
Length = 274
Score = 43.2 bits (97), Expect = 1e-05
Identities = 25/71 (35%), Positives = 35/71 (49%)
Frame = +1
Query: 538 NKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNALVGIVSFGKSNAN 717
N++ C + Y V TD CAG + GG+D D G P LVG+VS+G A
Sbjct: 194 NQKECNKAYSDFGGV-TDRMLCAGY-QQGGKDACQGDSGGPLVADGKLVGVVSWGYGCAQ 251
Query: 718 DIYPVVLTSIS 750
YP V + ++
Sbjct: 252 AGYPGVYSRVA 262
>Z18889-1|CAA79327.1| 274|Anopheles gambiae trypsin protein.
Length = 274
Score = 43.2 bits (97), Expect = 1e-05
Identities = 25/71 (35%), Positives = 35/71 (49%)
Frame = +1
Query: 538 NKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNALVGIVSFGKSNAN 717
N++ C + Y V TD CAG + GG+D D G P LVG+VS+G A
Sbjct: 194 NQKECNKAYSDFGGV-TDRMLCAGY-QQGGKDACQGDSGGPLVADGKLVGVVSWGYGCAQ 251
Query: 718 DIYPVVLTSIS 750
YP V + ++
Sbjct: 252 AGYPGVYSRVA 262
>Z22930-6|CAA80518.1| 277|Anopheles gambiae trypsin protein.
Length = 277
Score = 42.7 bits (96), Expect = 1e-05
Identities = 25/70 (35%), Positives = 34/70 (48%)
Frame = +1
Query: 544 ENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNALVGIVSFGKSNANDI 723
E+C + Y + TD CAG + GG+D D G P LVG+VS+G A
Sbjct: 199 EDCSDAYMWFGEI-TDRMLCAGY-QQGGKDACQGDSGGPLVADGKLVGVVSWGYGCAQPG 256
Query: 724 YPVVLTSISS 753
YP V ++S
Sbjct: 257 YPGVYGRVAS 266
Score = 24.6 bits (51), Expect = 3.7
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 263 GSSRRSEPGEISYVHFAVNHPEFSEENYDKDVSIVRVTHAIHF 391
GSS + G + V V HP++ D D S++ + + F
Sbjct: 106 GSSEHATGGTLVGVLRTVEHPQYDGNTIDFDFSLMELETELTF 148
>Z18890-1|CAA79328.1| 277|Anopheles gambiae trypsin protein.
Length = 277
Score = 42.7 bits (96), Expect = 1e-05
Identities = 25/70 (35%), Positives = 34/70 (48%)
Frame = +1
Query: 544 ENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNALVGIVSFGKSNANDI 723
E+C + Y + TD CAG + GG+D D G P LVG+VS+G A
Sbjct: 199 EDCSDAYMWFGEI-TDRMLCAGY-QQGGKDACQGDSGGPLVADGKLVGVVSWGYGCAQPG 256
Query: 724 YPVVLTSISS 753
YP V ++S
Sbjct: 257 YPGVYGRVAS 266
Score = 24.6 bits (51), Expect = 3.7
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 263 GSSRRSEPGEISYVHFAVNHPEFSEENYDKDVSIVRVTHAIHF 391
GSS + G + V V HP++ D D S++ + + F
Sbjct: 106 GSSEHATGGTLVGVLRTVEHPQYDGNTIDFDFSLMELETELTF 148
>Z22930-5|CAA80517.1| 275|Anopheles gambiae trypsin protein.
Length = 275
Score = 41.9 bits (94), Expect = 2e-05
Identities = 26/80 (32%), Positives = 35/80 (43%)
Frame = +1
Query: 511 LHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNALVGI 690
L + N++ C Y + TD CAG R GG+D D G P LVG+
Sbjct: 186 LRAANIPTVNQKECTIAYSSSGGI-TDRMLCAGYKR-GGKDACQGDSGGPLVVDGKLVGV 243
Query: 691 VSFGKSNANDIYPVVLTSIS 750
VS+G A YP V ++
Sbjct: 244 VSWGFGCAMPGYPGVYARVA 263
Score = 28.3 bits (60), Expect = 0.30
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 263 GSSRRSEPGEISYVHFAVNHPEFSEENYDKDVSIVRVTHAIHF 391
GSSR + G + V + HP + + D D S++ + + F
Sbjct: 104 GSSRHASGGTVVRVARVLEHPNYDDSTIDYDFSLMELETELTF 146
>Z22930-1|CAA80513.1| 273|Anopheles gambiae trypsin-related
protease protein.
Length = 273
Score = 40.7 bits (91), Expect = 5e-05
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 538 NKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNALVGIVSFGKSNAN 717
N++ C + Y+ + + T+ FCAG + GG D G P + L+G+VS+
Sbjct: 193 NQQECNQAYQSYGGI-TEQMFCAGY-KQGGTGTCRNDSGGPFVAEGKLIGVVSWSHECEL 250
Query: 718 DIYPVVLTSISSFTE 762
YP V ++S E
Sbjct: 251 AGYPGVYARVASVRE 265
Score = 27.1 bits (57), Expect = 0.69
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +2
Query: 248 PSLIAGSSRRSEPGEISYVHFAVNHPEFSEENYDKDVSIVRVTHAIHFGPN 400
P++ GSS + G + ++ V HP S + D++++ + I F N
Sbjct: 97 PTVRVGSSEHAAGGTVLHLVRIVPHPGHSSSANNYDIALLELESEITFNDN 147
>Z32645-2|CAA83568.1| 259|Anopheles gambiae chymotrypsin-like
protease ANCHYM1 protein.
Length = 259
Score = 35.5 bits (78), Expect = 0.002
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +1
Query: 511 LHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNALVGI 690
L L ++ + E+C + KG D TD L + G N D G P ++ LVG+
Sbjct: 169 LQSLNVVTLSNEDCNK--KGGDPGYTDVGHLCTLTKTG-EGACNGDSGGPLVYEGKLVGV 225
Query: 691 VSFG 702
V+FG
Sbjct: 226 VNFG 229
>Z18887-1|CAA79325.1| 259|Anopheles gambiae chymotrypsin 1 protein.
Length = 259
Score = 35.5 bits (78), Expect = 0.002
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +1
Query: 511 LHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNALVGI 690
L L ++ + E+C + KG D TD L + G N D G P ++ LVG+
Sbjct: 169 LQSLNVVTLSNEDCNK--KGGDPGYTDVGHLCTLTKTG-EGACNGDSGGPLVYEGKLVGV 225
Query: 691 VSFG 702
V+FG
Sbjct: 226 VNFG 229
>Z49833-1|CAA89994.1| 250|Anopheles gambiae serine proteinase
protein.
Length = 250
Score = 33.5 bits (73), Expect = 0.008
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Frame = +1
Query: 511 LHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAP--AFFQNA-- 678
L ++ + + + E C Q + + D CAG + GG+D D G P F A
Sbjct: 149 LQEVHVPILSNEQCHNQTQYFRFQINDRMMCAG-IPEGGKDSCQGDSGGPMHVFDTEANR 207
Query: 679 --LVGIVSFGKSNANDIYPVVLTSISSF 756
+ G+VS+G A +P + ++ F
Sbjct: 208 FVIAGVVSWGFGCAQPRFPGIYARVNRF 235
>Z49813-1|CAA89967.1| 247|Anopheles gambiae serine proteinase
protein.
Length = 247
Score = 33.1 bits (72), Expect = 0.011
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +1
Query: 520 LELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA----LVG 687
+++ + + CR R+ T N CAG G +D D G P +N +VG
Sbjct: 153 VDVPILTLDQCRSMKYRASRI-TSNMLCAG---KGKQDSCQGDSGGPLLVRNGDKHEIVG 208
Query: 688 IVSFGKSNANDIYPVVLTSISSF 756
IVS+G YP V T ++ +
Sbjct: 209 IVSWGVGCGRAGYPGVYTRVARY 231
>Z32645-1|CAA83567.1| 258|Anopheles gambiae chymotrypsinogen-like
protease ANCHYM2 protein.
Length = 258
Score = 32.7 bits (71), Expect = 0.014
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +1
Query: 511 LHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNALVGI 690
L L ++ + E+C+ + G+ V C L +AG N D G P ++ LVG+
Sbjct: 169 LQSLNVVTLSNEDCKAKM-GNPENVDLGHVCT-LTKAG-EGACNGDSGGPLVYEGKLVGV 225
Query: 691 VSFG 702
V+FG
Sbjct: 226 VNFG 229
>Z18888-1|CAA79326.1| 258|Anopheles gambiae chymotrypsin 2 protein.
Length = 258
Score = 32.3 bits (70), Expect = 0.018
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +1
Query: 511 LHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNALVGI 690
L L ++ + E+C+ + G+ V C L +AG N D G P ++ LVG+
Sbjct: 169 LQSLNVVTLSNEDCKAKM-GNPENVDFPDVCT-LTKAG-EGACNGDSGGPLVYEGKLVGV 225
Query: 691 VSFG 702
V+FG
Sbjct: 226 VNFG 229
>AF117748-1|AAD38334.1| 365|Anopheles gambiae serine protease 14A
protein.
Length = 365
Score = 31.5 bits (68), Expect = 0.032
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 517 KLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAF---FQNALVG 687
K + V +E C +++K + V + CAG V G D + D G P F G
Sbjct: 277 KAQFPVFAQEECDKKWKNIE--VIGEQLCAGGVF--GIDSCSGDSGGPLMVKRFYWIQEG 332
Query: 688 IVSFGKSNANDIYPVVLTSISSF 756
++SFG A + +P V T +SS+
Sbjct: 333 VISFGNQCALEGWPGVYTRVSSY 355
>DQ974163-1|ABJ52803.1| 595|Anopheles gambiae serpin 4B protein.
Length = 595
Score = 24.6 bits (51), Expect = 3.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 222 HGEFYDPAYRRLSLDLPVAVSPVKYLMFTLLLTIPNSLRR 341
HG + P Y + LD + P K+ + T+ + +PN+ R
Sbjct: 273 HGGCF-PYYESVELDARIIGIPYKHNVSTMYVIMPNNSNR 311
>AF045250-1|AAC02700.1| 259|Anopheles gambiae serine proteinase
protein.
Length = 259
Score = 24.2 bits (50), Expect = 4.9
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +1
Query: 511 LHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVR--AGGRDYDNTDLGAPAFFQNALV 684
L K+ LI+ +E+C+ K + + + CAG + G L + +
Sbjct: 170 LMKVNLILRTEEDCQTIGK-----IDETQICAGGYKNVTGCTADSGGPLTVTIDGEQMQI 224
Query: 685 GIVSFGKSNANDIYPVVLTSISSF 756
G++S+G+ P+V +S+ F
Sbjct: 225 GVLSYGEKPCQARLPIVYSSVMYF 248
>DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein.
Length = 847
Score = 23.8 bits (49), Expect = 6.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 190 LVRTIPAHCWNH 155
L T+P HCW H
Sbjct: 560 LTDTVPIHCWIH 571
>AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform B
protein.
Length = 755
Score = 23.8 bits (49), Expect = 6.4
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 248 PSLIAGSSRRSEPGEISYVHFAVNH 322
P A + R EP I Y HF V +
Sbjct: 148 PDECARACREGEPPRICYYHFTVEY 172
>AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform A
protein.
Length = 753
Score = 23.8 bits (49), Expect = 6.4
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 248 PSLIAGSSRRSEPGEISYVHFAVNH 322
P A + R EP I Y HF V +
Sbjct: 148 PDECARACREGEPPRICYYHFTVEY 172
>U21917-1|AAA73920.1| 271|Anopheles gambiae serine protease
protein.
Length = 271
Score = 23.4 bits (48), Expect = 8.5
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +1
Query: 640 NTDLGAPAFFQNALVGIVSFGKSNANDIYPVVLTSISSF 756
N D G PA N LVG +F + P +S F
Sbjct: 222 NGDSGGPAILNNQLVGRPNFIINYCGSASPDGYAKVSDF 260
>AJ459779-1|CAD30839.1| 405|Anopheles gambiae clip-domain serine
protease protein.
Length = 405
Score = 23.4 bits (48), Expect = 8.5
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Frame = +1
Query: 517 KLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA------ 678
KL L +E C + ++ + + CAG RA +D D G+P +
Sbjct: 311 KLSLPYVEREKCSKTFRPWSFALGPGQMCAGGERA--KDTCAGDSGSPLMSYDMKRAIWY 368
Query: 679 LVGIVSFG 702
+ GIVS G
Sbjct: 369 ITGIVSLG 376
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 918,594
Number of Sequences: 2352
Number of extensions: 21993
Number of successful extensions: 66
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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