Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0819
(817 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical ... 148 4e-36
AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical ... 43 3e-04
Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical pr... 37 0.015
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 37 0.015
AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily a... 36 0.046
Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 33 0.24
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 33 0.24
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 33 0.24
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 32 0.43
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 32 0.56
U58762-2|AAK39302.1| 722|Caenorhabditis elegans Hypothetical pr... 31 0.99
U58762-1|AAK39301.1| 732|Caenorhabditis elegans Hypothetical pr... 31 0.99
U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated p... 30 1.7
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 30 1.7
AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore... 30 1.7
AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical... 30 1.7
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 30 2.3
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 30 2.3
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 30 2.3
AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical ... 30 2.3
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 29 3.0
AF067942-4|AAG45573.2| 324|Caenorhabditis elegans Hypothetical ... 29 4.0
Z74475-4|CAD01086.1| 185|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical pr... 28 7.0
AF068713-4|AAC17795.2| 398|Caenorhabditis elegans Hypothetical ... 28 7.0
Z81523-5|CAB04240.2| 298|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical pr... 28 9.2
AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore... 28 9.2
>AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical
protein Y79H2A.6 protein.
Length = 368
Score = 148 bits (359), Expect = 4e-36
Identities = 57/87 (65%), Positives = 75/87 (86%)
Frame = +3
Query: 510 GSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYI 689
GSGA+L+S+CY+EKEN+WWVSK IKKPIRSTVT +DWH NN+LL GS DFK RVFSAY+
Sbjct: 120 GSGAKLVSVCYYEKENDWWVSKQIKKPIRSTVTCLDWHSNNVLLAVGSCDFKCRVFSAYV 179
Query: 690 KDIEDQPGPNVWGSKLPLGQLLAEFPI 770
K+++++P PN WG K+P GQL++E+ +
Sbjct: 180 KEVDEKPSPNPWGQKMPFGQLMSEYSV 206
Score = 113 bits (271), Expect = 2e-25
Identities = 49/86 (56%), Positives = 61/86 (70%)
Frame = +1
Query: 256 NEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWAT 435
N++HI++ DW+ + L EHDL V G+DW TNRIV+CS D+NA+VWT D W
Sbjct: 36 NDIHIFEWRNGDWQSIHTLSEHDLPVTGLDWGTKTNRIVSCSQDKNAFVWT-FDKNVWKP 94
Query: 436 TLVLLRINRAATCVKWSPMENKFAAG 513
LVL+R NRAAT VKWSP+ENKFA G
Sbjct: 95 ELVLVRFNRAATYVKWSPLENKFAVG 120
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 197 PITCHAWNKDRSQIAFS 247
PITCHAWNKDR+QIA S
Sbjct: 16 PITCHAWNKDRTQIAVS 32
>AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical
protein Y18D10A.9 protein.
Length = 337
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = +1
Query: 262 VHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTL 441
V +Y++E ++ + N L H+ V ++ + + TCS D++ + W Q +D ++ +
Sbjct: 91 VVVYQQEDGEFAEVNKLEGHESEVKCAVFSKSDEFLATCSRDKSVWFWQQDEDEDFSVSS 150
Query: 442 VLLRINRAATCVKWSPMEN 498
+L + V W P E+
Sbjct: 151 ILQPHTQDVKQVAWHPTED 169
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 546 EKENNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSADFKVRVF 677
+++ ++ VS I +P V + WHP LLV+ S D +R +
Sbjct: 141 DEDEDFSVSS-ILQPHTQDVKQVAWHPTEDLLVSCSYDSSIRFY 183
>Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical
protein K08F9.2 protein.
Length = 600
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/72 (22%), Positives = 32/72 (44%)
Frame = +1
Query: 304 NNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKW 483
N+ H +V+ + W+P+ R+ T S+D + +W G+ + + V+W
Sbjct: 519 NSWTFHTSKVLTVAWSPDNQRLATGSIDTSVIIWDMKKPGEHPVIIKGAHPMSSVNVVRW 578
Query: 484 SPMENKFAAGQE 519
+AGQ+
Sbjct: 579 LDETTVVSAGQD 590
Score = 31.1 bits (67), Expect = 0.99
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 313 VEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 405
V H + + W+P+ +RI T S D++ +W
Sbjct: 234 VAHTGSIFALAWSPDQSRIATASADKSVKIW 264
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/88 (18%), Positives = 32/88 (36%)
Frame = +1
Query: 250 KHNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKW 429
K +VH+YK G+ + +EH + + ++ + + + R ++ D
Sbjct: 456 KDAKVHVYKLNGDGRLEELKKIEHSAEITAVSFSDDGEYLAVTDLARKVIPYSVSTDFSV 515
Query: 430 ATTLVLLRINRAATCVKWSPMENKFAAG 513
+ V WSP + A G
Sbjct: 516 TSPNSWTFHTSKVLTVAWSPDNQRLATG 543
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 286 NDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQ 411
++W + + ++ H L V I W P+ R++T S DR A ++T+
Sbjct: 596 SNWSKKSEIIGHQLTVTQIAWNPSGTRLLTVSRDRTAKLYTE 637
>AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily
assigned gene nameprotein 305 protein.
Length = 869
Score = 35.5 bits (78), Expect = 0.046
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 271 YKKEGNDWKQTN-NLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVL 447
+K +D + N NL H + + W + +++ +C YVW + DD +W+ LV
Sbjct: 51 FKPTPDDLTRYNFNLRGHHNAIRMVTWNKSQSKLASCDASGIIYVWVRNDD-RWSVELVN 109
Query: 448 LRINRAATCVKWSP 489
R + + + WSP
Sbjct: 110 DRGVKVSD-LSWSP 122
>Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical
protein T04A8.7a protein.
Length = 681
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 286 NDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC----SVDRNAYVWTQGDDGKWATTL 441
+ +KQ V+ D V G++WAP ++ + D+NA V+ + + GKW+ T+
Sbjct: 51 SSYKQFGLNVQPDNSVKGLEWAPAAEKLALIGDFNNWDQNANVYKKEEHGKWSITV 106
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +1
Query: 322 DLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENK 501
D + G+ +AP + T S D A VW D ++ VL C+ W P +
Sbjct: 217 DEAIRGLAFAPTDVKFATASDDGTARVW---DFARYTEERVLRGHGAEVRCIDWHPTKGL 273
Query: 502 FAAGQELD*YQFAILRRKIIGGCLSILR 585
A G D Q + G CL+ L+
Sbjct: 274 IATGSR-DTQQPVKIWDPKSGSCLATLQ 300
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = +1
Query: 301 TNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVK 480
TN+ H +V + W+P+ R+ T S+D + VW + + V
Sbjct: 529 TNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVI 588
Query: 481 WSPMENKFAAGQE 519
W +AGQ+
Sbjct: 589 WLNETTIVSAGQD 601
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 313 VEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 405
V H V G+ W+P+ +I + S D+ +W
Sbjct: 236 VAHSGSVFGLTWSPDGTKIASASADKTIKIW 266
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = +1
Query: 301 TNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVK 480
TN+ H +V + W+P+ R+ T S+D + VW + + V
Sbjct: 529 TNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVI 588
Query: 481 WSPMENKFAAGQE 519
W +AGQ+
Sbjct: 589 WLNETTIVSAGQD 601
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 313 VEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 405
V H V G+ W+P+ +I + S D+ +W
Sbjct: 236 VAHSGSVFGLTWSPDGTKIASASADKTIKIW 266
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 32.3 bits (70), Expect = 0.43
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 292 WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGD 417
W+ L HD R++ +D +P+ + + + DR +W Q D
Sbjct: 454 WQPLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLWAQSD 495
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 31.9 bits (69), Expect = 0.56
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 292 WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWT 408
W + +L +H V G+ + N +VTCS+D++ V++
Sbjct: 453 WSEVVSLSDHSGPVTGVRFGENARSLVTCSLDKSLRVFS 491
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 543 FEKENNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSADFKVRVFSA 683
+EKE K K I + V HP+NI ++ SAD +RV+SA
Sbjct: 238 YEKEQVMQTFKGHNKKINAVVL----HPDNITAISASADSHIRVWSA 280
>U58762-2|AAK39302.1| 722|Caenorhabditis elegans Hypothetical
protein T27F7.2b protein.
Length = 722
Score = 31.1 bits (67), Expect = 0.99
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = -1
Query: 670 RTLKSAEPATSKMLLGCQSIDVTVERMGFLICLDTHQLFSFSK*QI-DINLAPDPQ 506
R + S +P TS G QS+++++ +G IC + L S S ++ DI+ PD Q
Sbjct: 165 RRIDSFQPTTSG---GMQSVELSISVLGVKICCEKTVLMSHSLRRVTDISARPDTQ 217
>U58762-1|AAK39301.1| 732|Caenorhabditis elegans Hypothetical
protein T27F7.2a protein.
Length = 732
Score = 31.1 bits (67), Expect = 0.99
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = -1
Query: 670 RTLKSAEPATSKMLLGCQSIDVTVERMGFLICLDTHQLFSFSK*QI-DINLAPDPQ 506
R + S +P TS G QS+++++ +G IC + L S S ++ DI+ PD Q
Sbjct: 175 RRIDSFQPTTSG---GMQSVELSISVLGVKICCEKTVLMSHSLRRVTDISARPDTQ 227
>U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated
protein 78, isoform b protein.
Length = 517
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 313 VEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 405
V H V G+ W+P+ +I + S D+ +W
Sbjct: 236 VAHSGSVFGLTWSPDGTKIASASADKTIKIW 266
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Frame = +3
Query: 498 QVCCGSGARLISICYFEKENNWWVSKHIK--KPIRS---TVTSIDWHPNNILLVAGSADF 662
QV R I+ F+K W + K +R V + W ++ LLV+GSAD
Sbjct: 365 QVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSRLLVSGSADS 424
Query: 663 KVRVFSAYIKDI-EDQPG 713
++VF K + D PG
Sbjct: 425 TLKVFELKTKSLYYDLPG 442
>AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform a protein.
Length = 313
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Frame = +1
Query: 271 YKKEGNDWKQTNNLVEHDLRVMGIDWAPNT------NRIVTCSVDRNAYVWTQGD-DGKW 429
Y N+W + H+ V + WAP + R+V+ D+N +W D +W
Sbjct: 135 YDNSSNEWISSKIQKCHEQGVNSVCWAPGSADPAAKKRLVSAGNDKNVKIWAFDDATNEW 194
Query: 430 ATTLVLLRINRAATCVKWSPMEN 498
L W P+ N
Sbjct: 195 ILEKTLAGHTDFVREAAWCPVTN 217
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 489 HGEQVCCGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHPNN 632
+G + S I I ++ +N W+S I+K V S+ W P +
Sbjct: 117 YGLMLASASADGDIGILRYDNSSNEWISSKIQKCHEQGVNSVCWAPGS 164
>AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical
protein Y110A7A.8 protein.
Length = 504
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -2
Query: 417 ISLSPDVSITV-NRTRNNTVGVGS-PINPHHSKVVFHKVVCLLP 292
++ P ++ V +T+ N +G + NPHH + FH++V +P
Sbjct: 250 LATMPSCNVQVLGKTKKNLIGFSTVSTNPHHGFIYFHQLVQKMP 293
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 307 NLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 405
+L H L V +D AP++ VT SVD++ VW
Sbjct: 581 SLYGHSLPVTCVDIAPSSKLCVTGSVDKSVKVW 613
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 29.9 bits (64), Expect = 2.3
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +3
Query: 603 VTSIDWHPNNILLVAGSADFKVRVFSA 683
V +++W PN L +GS D+++ +++A
Sbjct: 136 VLTVEWSPNGKYLASGSIDYRIIIYNA 162
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 29.9 bits (64), Expect = 2.3
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +3
Query: 603 VTSIDWHPNNILLVAGSADFKVRVFSA 683
V +++W PN L +GS D+++ +++A
Sbjct: 424 VLTVEWSPNGKYLASGSIDYRIIIYNA 450
>AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical
protein Y43F4B.4 protein.
Length = 363
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 274 KKEGNDWKQTNNLVEHDLRVMGIDWA-PNTNRIV-TCSVDRNAYVWTQ 411
K +GN W+++ + H V + WA P +IV TCS DR +W +
Sbjct: 47 KPDGN-WRRSAHWKCHGGAVWRVIWAHPEFGQIVATCSYDRTIVIWEE 93
Score = 29.5 bits (63), Expect = 3.0
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 340 IDWAPNTNRIVTCSVDRNAYVWTQGDDGKW 429
+ + P+ R+ TC+ D +W + DG W
Sbjct: 23 VSFDPHGRRMATCASDMTMAIWDRKPDGNW 52
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +1
Query: 337 GIDWAP-NTNRIVTCSVDRNAYVWTQGDDGKWAT-TLVLLRINRAATCVKWSPMENKFAA 510
G+ W+ T + T + + Y+W + G+WA L ++ + WSP E A
Sbjct: 233 GLAWSSLKTGDLATGDIIKKIYLWQMKEGGQWAVGANPLTGHKKSVEDLAWSPTETGLLA 292
Query: 511 GQELD 525
D
Sbjct: 293 SCSAD 297
>AF067942-4|AAG45573.2| 324|Caenorhabditis elegans Hypothetical
protein ZK6.6 protein.
Length = 324
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 559 IGGCLSILRSPFVRL*HLLIGIPI 630
+G C SPF+ L H +IGIP+
Sbjct: 255 LGSCFIFFLSPFLNLYHYVIGIPL 278
>Z74475-4|CAD01086.1| 185|Caenorhabditis elegans Hypothetical
protein R04F11.5 protein.
Length = 185
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 636 LLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLGQL 752
LLVA + K+R++S+ +++D P +W + + +G L
Sbjct: 118 LLVASDYNDKLRIYSSQDSNLKDWPWTELWRNIVDIGAL 156
>Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical protein
F36D3.5 protein.
Length = 1152
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 265 HIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDD 420
HI+ E D K TN+ +E + + APNT ++ D N + T D
Sbjct: 931 HIWMDERTDNKITNDFMEKFQAITSDEAAPNTTHVIV-KTDENGVLETDDLD 981
>AF068713-4|AAC17795.2| 398|Caenorhabditis elegans Hypothetical
protein T24A6.8 protein.
Length = 398
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 579 YA*TPTNYFPSQNS---KLISI*LLTRSKLVLHGRPFHASRCSVDTQK 445
Y T +N + S+N+ KLIS +L SK ++ RP H C V T K
Sbjct: 5 YCNTFSNVWMSENNVEIKLISTKILKPSKCMVCVRPAHGYHCDVATCK 52
>Z81523-5|CAB04240.2| 298|Caenorhabditis elegans Hypothetical
protein F32H2.4 protein.
Length = 298
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +3
Query: 489 HGEQVCCGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSADFKV 668
+G+ + GS I I Y + KH + S+ WHPN++LL ++D
Sbjct: 229 NGQLLASGSEDHSIDIAYVPDGSRCHEIKHTGETY-----SVAWHPNSLLLAYTASDSMD 283
Query: 669 RVFSAYIK 692
+A++K
Sbjct: 284 NREAAHVK 291
>Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical
protein R01H10.3d protein.
Length = 495
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 319 HDLRVMGIDWAP-NTNRIVTCSVDRNAYVWTQGDDG 423
H + + W+P N N I +CS D VW D G
Sbjct: 78 HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRG 113
>Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical
protein R01H10.3c protein.
Length = 607
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 319 HDLRVMGIDWAP-NTNRIVTCSVDRNAYVWTQGDDG 423
H + + W+P N N I +CS D VW D G
Sbjct: 78 HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRG 113
>Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical
protein R01H10.3b protein.
Length = 538
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 319 HDLRVMGIDWAP-NTNRIVTCSVDRNAYVWTQGDDG 423
H + + W+P N N I +CS D VW D G
Sbjct: 78 HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRG 113
>Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical
protein R01H10.3a protein.
Length = 605
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 319 HDLRVMGIDWAP-NTNRIVTCSVDRNAYVWTQGDDG 423
H + + W+P N N I +CS D VW D G
Sbjct: 78 HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRG 113
>AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform b protein.
Length = 211
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 489 HGEQVCCGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHPNN 632
+G + S I I ++ +N W+S I+K V S+ W P +
Sbjct: 117 YGLMLASASADGDIGILRYDNSSNEWISSKIQKCHEQGVNSVCWAPGS 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,440,508
Number of Sequences: 27780
Number of extensions: 428233
Number of successful extensions: 1153
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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