Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0818
         (363 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   1.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    20   9.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    20   9.0  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    20   9.0  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 12/18 (66%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = -3

Query: 55  ITLFLLSV-VILLYYTAL 5
           I LF LSV VIL+YY +L
Sbjct: 325 IILFYLSVFVILVYYASL 342


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -2

Query: 77  IPYKRYYYNVVFT*RGNTAILHSI 6
           +PYK  Y N++    G   I+ ++
Sbjct: 135 VPYKHLYVNILIHLSGLVTIVATL 158


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 300 YFKNIS*YNFKYYKRIV 250
           +FK  S Y F YY  +V
Sbjct: 69  FFKEASLYCFNYYVIVV 85


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -2

Query: 77  IPYKRYYYNVVFT*RGNTAILHSI 6
           +PYK  Y N++    G   I+ ++
Sbjct: 135 VPYKHLYVNILIHLSGLVTIVATL 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,834
Number of Sequences: 336
Number of extensions: 1323
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7404950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)