BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= mg--0815 (545 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_12656| Best HMM Match : CS (HMM E-Value=0.0018) 28 4.3 SB_48978| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7 SB_7565| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) 28 5.7 SB_54524| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) 28 5.7 SB_54477| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) 28 5.7 SB_53647| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7 SB_29735| Best HMM Match : Kunitz_BPTI (HMM E-Value=2.7) 28 5.7 >SB_12656| Best HMM Match : CS (HMM E-Value=0.0018) Length = 277 Score = 28.3 bits (60), Expect = 4.3 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 Query: 111 YTEYPEEHEQNEIHKILENFHFKFNPKP 194 Y EY ++HE ++ENFH NP+P Sbjct: 60 YIEYGDQHES-----LVENFHLSPNPRP 82 >SB_48978| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 69 Score = 27.9 bits (59), Expect = 5.7 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = +2 Query: 374 YTYI*NSNRNFYIS*NKHSPNLLLTQAWILYNNRT 478 Y +I +N N Y+ N+ SP++ +T +L N R+ Sbjct: 3 YDFIWTANGNIYLRKNERSPSIHVTDESVLINLRS 37 >SB_7565| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) Length = 267 Score = 27.9 bits (59), Expect = 5.7 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = +2 Query: 374 YTYI*NSNRNFYIS*NKHSPNLLLTQAWILYNNRT 478 Y +I +N N Y+ N+ SP++ +T +L N R+ Sbjct: 201 YDFIWTANGNIYLRKNERSPSIHVTDESVLINLRS 235 >SB_54524| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) Length = 259 Score = 27.9 bits (59), Expect = 5.7 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = +2 Query: 374 YTYI*NSNRNFYIS*NKHSPNLLLTQAWILYNNRT 478 Y +I +N N Y+ N+ SP++ +T +L N R+ Sbjct: 201 YDFIWTANGNIYLRKNERSPSIHVTDESVLINLRS 235 >SB_54477| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) Length = 267 Score = 27.9 bits (59), Expect = 5.7 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = +2 Query: 374 YTYI*NSNRNFYIS*NKHSPNLLLTQAWILYNNRT 478 Y +I +N N Y+ N+ SP++ +T +L N R+ Sbjct: 201 YDFIWTANGNIYLRKNERSPSIHVTDESVLINLRS 235 >SB_53647| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 267 Score = 27.9 bits (59), Expect = 5.7 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = +2 Query: 374 YTYI*NSNRNFYIS*NKHSPNLLLTQAWILYNNRT 478 Y +I +N N Y+ N+ SP++ +T +L N R+ Sbjct: 201 YDFIWTANGNIYLRKNERSPSIHVTDESVLINLRS 235 >SB_29735| Best HMM Match : Kunitz_BPTI (HMM E-Value=2.7) Length = 211 Score = 27.9 bits (59), Expect = 5.7 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = +2 Query: 374 YTYI*NSNRNFYIS*NKHSPNLLLTQAWILYNNRT 478 Y +I +N N Y+ N+ SP++ +T +L N R+ Sbjct: 3 YDFIWTANGNIYLRKNERSPSIHVTDESVLINLRS 37 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,374,517 Number of Sequences: 59808 Number of extensions: 321754 Number of successful extensions: 522 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 486 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 518 length of database: 16,821,457 effective HSP length: 78 effective length of database: 12,156,433 effective search space used: 1252112599 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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