Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0815
         (545 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.2  
Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.        23   8.7  
AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding pr...    23   8.7  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 176  EMEIFQYLVYFVLFMFFGVF 117
            E  I+ YL YFV F+ FG F
Sbjct: 1535 ETNIYMYL-YFVFFIIFGSF 1553


>Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.
          Length = 91

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 23 GTTKYNIWNFCRSGMLKRTPGLV 91
          GTTK  I    R G +KR  GL+
Sbjct: 29 GTTKPAIRRLARRGGVKRISGLI 51


>AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding
           protein AgamOBP53 protein.
          Length = 171

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 167 IFQYLVYFVLFMFFGVFSIKH*CQ 96
           +F Y +Y+     F  F + H CQ
Sbjct: 11  LFMYNIYYRALWLFLKFEVPHCCQ 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,385
Number of Sequences: 2352
Number of extensions: 12486
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)