Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0815
         (545 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   2.7  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   4.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   6.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   6.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   6.2  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    21   6.2  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    21   6.2  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 22  WNNQI*YLEFLQEWYA*ENTWTCQ 93
           WN +I  L F ++    ENT TCQ
Sbjct: 368 WNMKISNLSFDKQSLLKENTVTCQ 391


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 112 ILNTPKNMNKTKYTRY 159
           +  TPKN +  +YT Y
Sbjct: 158 LAETPKNTSAVRYTHY 173


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 126 RGIQYKTLVPKLTSPGVL 73
           R + YK  + KLT+ GVL
Sbjct: 153 RNVGYKIPITKLTAMGVL 170


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 126 RGIQYKTLVPKLTSPGVL 73
           R + YK  + KLT+ GVL
Sbjct: 153 RNVGYKIPITKLTAMGVL 170


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 126 RGIQYKTLVPKLTSPGVL 73
           R + YK  + KLT+ GVL
Sbjct: 153 RNVGYKIPITKLTAMGVL 170


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 159 VSCVFRFVHVLRGIQYKTLVPK 94
           V+C+   + V+RGI   T+V K
Sbjct: 7   VTCLLAALTVVRGIDQDTVVAK 28


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 159 VSCVFRFVHVLRGIQYKTLVPK 94
           V+C+   + V+RGI   T+V K
Sbjct: 7   VTCLLAALTVVRGIDQDTVVAK 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,437
Number of Sequences: 438
Number of extensions: 3672
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)