Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0814
(470 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 128 2e-30
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 128 3e-30
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 127 4e-30
04_04_0040 + 22322839-22324173 32 0.27
08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378 30 0.82
11_06_0087 - 19919224-19922304 29 1.4
05_02_0043 + 5964749-5966406,5966725-5966791,5967174-5967329,596... 29 1.4
04_03_1015 - 21734381-21736534 29 1.4
12_02_0759 - 22882435-22882731 29 1.9
06_03_0256 - 18841627-18841993,18842087-18842415,18842512-188427... 29 1.9
04_01_0492 + 6476586-6476873,6477414-6477686,6477769-6477948,647... 28 3.3
02_02_0742 - 13605125-13605539,13605964-13606246,13606457-13606604 28 3.3
06_03_1011 - 26882011-26882157,26882576-26884248,26884607-268847... 28 4.4
06_01_1145 - 9575173-9575553,9575712-9575858,9575971-9576024,957... 27 5.8
04_04_0946 - 29579779-29580004,29580098-29580210 27 5.8
02_05_0202 + 26708049-26709074 27 5.8
08_02_0757 + 20840885-20841281,20842937-20843025,20843132-208432... 27 7.6
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 128 bits (309), Expect = 2e-30
Identities = 55/84 (65%), Positives = 70/84 (83%)
Frame = +2
Query: 2 EAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFES 181
+AK+KLCKV+ V G K +PYL T+DGRTIRYPDPLIK ND+I++D+ T KI+DFIKF+
Sbjct: 118 DAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDV 177
Query: 182 GNLCMITGGRNLGRVGTIVSRERH 253
GN+ M+TGGRN GRVG I +RE+H
Sbjct: 178 GNVVMVTGGRNTGRVGVIKNREKH 201
Score = 81.8 bits (193), Expect = 3e-16
Identities = 35/56 (62%), Positives = 46/56 (82%)
Frame = +1
Query: 256 GSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKRIAA 423
GSF+ +H++D+ GH FATRL NVF IGKG K ++SLP+GKGI+L+I EE+ KR AA
Sbjct: 203 GSFETIHVEDALGHAFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRDAA 258
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 128 bits (308), Expect = 3e-30
Identities = 55/84 (65%), Positives = 70/84 (83%)
Frame = +2
Query: 2 EAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFES 181
+AK+KLCKV+ V G K +P+L T+DGRTIRYPDPLIK ND+I++D+ T KI+DFIKF+
Sbjct: 134 DAKFKLCKVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDV 193
Query: 182 GNLCMITGGRNLGRVGTIVSRERH 253
GN+ M+TGGRN GRVG I SRE+H
Sbjct: 194 GNIVMVTGGRNTGRVGVIKSREKH 217
Score = 74.5 bits (175), Expect = 4e-14
Identities = 32/55 (58%), Positives = 43/55 (78%)
Frame = +1
Query: 256 GSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKRIA 420
GSF+ +H++D+ GH FATR+ NVF IGK K ++SLP+GKGI+L+I EE KR A
Sbjct: 219 GSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIKLSIIEEARKRNA 273
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 127 bits (307), Expect = 4e-30
Identities = 54/84 (64%), Positives = 70/84 (83%)
Frame = +2
Query: 2 EAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFES 181
+AK+KLCKV+ V G K +PYL T+DGRTIRYPDP+IK ND+I++D+ T KI+DFIKF+
Sbjct: 118 DAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDV 177
Query: 182 GNLCMITGGRNLGRVGTIVSRERH 253
GN+ M+TGGRN GRVG I +RE+H
Sbjct: 178 GNVVMVTGGRNTGRVGVIKNREKH 201
Score = 81.4 bits (192), Expect = 3e-16
Identities = 35/56 (62%), Positives = 46/56 (82%)
Frame = +1
Query: 256 GSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKRIAA 423
GSF+ +H++D+ GH FATRL NVF IGKG K ++SLP+GKGI+L+I EE+ KR AA
Sbjct: 203 GSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRDAA 258
>04_04_0040 + 22322839-22324173
Length = 444
Score = 31.9 bits (69), Expect = 0.27
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +3
Query: 267 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 407
H H HG + RH++ +R R H L A G P + AG
Sbjct: 34 HLTHVDAHGNYSRHQLLRRAARRSHHRMSRLVARATGVPMTSSKAAG 80
>08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378
Length = 477
Score = 30.3 bits (65), Expect = 0.82
Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = +3
Query: 240 PARDIRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG--HPPHHRRGAGQA 413
P RL RH G HG R + E + GH H G P HH RG GQA
Sbjct: 15 PEAHARLPRHAPPAGGHGRGGRGQ-EGPIAIAAGHGRGHRGGGHGGPASPRHHLRGRGQA 73
>11_06_0087 - 19919224-19922304
Length = 1026
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 45 DLRMFRTW*RMMAA-PSAIQTHLSKSTIPSS*TLQLRRL 158
DL R W +A PS HLS ++PSS T Q RRL
Sbjct: 208 DLSSARDWPLAIAMLPSLTALHLSSCSLPSSSTQQWRRL 246
>05_02_0043 +
5964749-5966406,5966725-5966791,5967174-5967329,
5967782-5967865,5968020-5968073
Length = 672
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 267 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRS 422
H H G H H +H E +L +++ GH P+ R A Q H +
Sbjct: 325 HHGHTGHHIRHFLQLGWDYLHLTYKQEAANLGSSQNGHFPYRWRRASQYHEA 376
>04_03_1015 - 21734381-21736534
Length = 717
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +3
Query: 9 STSCVKSSVWRPDLRMFRTW*RMMAAPSAIQTHLSKSTIPSS 134
S+S V S+V+ LR+ T R +AA I THL+ ST PS+
Sbjct: 38 SSSQVPSAVYASLLRL-ATSHRSLAAARRIATHLASSTAPST 78
>12_02_0759 - 22882435-22882731
Length = 98
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 294 THLRHEVEQRVHNRQGHEGVH-LAAARQGHPPHHRRGAGQAHRSQG 428
TH RH + +R R+G G L A R P H G G+ R +G
Sbjct: 42 THERHHLVERGQRRRGDRGAGVLGADRVEEGPQH--GGGERRRGRG 85
>06_03_0256 -
18841627-18841993,18842087-18842415,18842512-18842749,
18844091-18844373,18844773-18844989,18845067-18845360
Length = 575
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 188 LCMITGGRNLGRVGTIVSRERH--PAPSTLCTSRTPR 292
LC T +G +G SR RH P P LC +R P+
Sbjct: 46 LCFATSKSKVGALGDGRSRRRHTEPRPHKLCHARYPQ 82
>04_01_0492 +
6476586-6476873,6477414-6477686,6477769-6477948,
6478436-6478696,6479171-6479303,6479404-6479494,
6479921-6480023,6480557-6480660,6480809-6480902,
6480985-6481140,6481224-6481286,6481388-6481453,
6481670-6481870,6481999-6482076,6482165-6482284,
6482382-6482462,6482548-6482633,6482920-6483031,
6483093-6483170,6483306-6483482
Length = 914
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 363 AARQGHPPHHRRGAG 407
AAR+GHPP H G G
Sbjct: 4 AARRGHPPPHENGVG 18
>02_02_0742 - 13605125-13605539,13605964-13606246,13606457-13606604
Length = 281
Score = 28.3 bits (60), Expect = 3.3
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 217 GARG--HHRVPRETSGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIR 384
GARG H R R T V +K +T T AT L + GT+A+ RG G R
Sbjct: 146 GARGGGHARRRRSTRRGGVPVPVKTATATTSATGLEVAPALEGGTRAFGLAGRGDGTR 203
>06_03_1011 -
26882011-26882157,26882576-26884248,26884607-26884783,
26885313-26885416,26885896-26886032
Length = 745
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +2
Query: 71 THDGRTIRYPDPLIKVNDSI-QLDIA---TTKIMDFIKFESGNLCMITG 205
+HD + + PDPL ND I ++ IA T ++D+ + + C + G
Sbjct: 599 SHDDKVVSEPDPLPVHNDKIDEVTIAAIQTCALVDYQQSQQNKPCSVNG 647
>06_01_1145 -
9575173-9575553,9575712-9575858,9575971-9576024,
9576692-9576862,9577004-9577231,9577392-9577478,
9577600-9577761
Length = 409
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/56 (26%), Positives = 20/56 (35%)
Frame = +3
Query: 213 TWGAWAPSCPARDIRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH 380
TW CP I + R + T L ++ H+ H HLA GH
Sbjct: 104 TWNQNGEKCPDNTIPIRRTKEEDVMRATSLT-TFGKKTHDMSSHPHSHLAGVTSGH 158
>04_04_0946 - 29579779-29580004,29580098-29580210
Length = 112
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = +3
Query: 309 EVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRAV 440
EV++ H R+ H + R+ H HH + Q R A+
Sbjct: 54 EVDRAKHRRKKRAAAHAVSVRKEHRNHHHHHRHHHQQPQPRPAI 97
>02_05_0202 + 26708049-26709074
Length = 341
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2
Query: 283 P*CAQCRRSRMSLAGHDGAHAPQVTASRDHTQVPG 179
P C + S +L GH +H A+ H Q PG
Sbjct: 265 PYCYRVFASGQALGGHKKSHVCSAAAAAAHAQTPG 299
>08_02_0757 +
20840885-20841281,20842937-20843025,20843132-20843257,
20843617-20844333,20844420-20844630,20844739-20845238,
20845998-20846023,20846393-20846531,20846579-20846660,
20846990-20847153
Length = 816
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -3
Query: 231 VPTRPKLRPPVIIHKFPDSNLMKSIIFVVAMSNWMESLTLISGSG*RM 88
+P RP +RP + K P S SI+ S W E + L G+ R+
Sbjct: 461 IPERPMVRPYHVHSKDPCSFDAGSIVDAWWNSGWWEGIVLQQGNDRRL 508
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,157,915
Number of Sequences: 37544
Number of extensions: 365521
Number of successful extensions: 1274
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1273
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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