Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0814
(470 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 0.71
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 24 0.71
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 1.2
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.2
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 2.9
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 2.9
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 6.7
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 8.8
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 21 8.8
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 21 8.8
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.2 bits (50), Expect = 0.71
Identities = 11/44 (25%), Positives = 16/44 (36%)
Frame = +3
Query: 276 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 407
H G G + H H+R G + + R P G+G
Sbjct: 1755 HSGTMGPPVGHPTNASAHSRSGSQSMPRQNGRYSRVPSQGGGSG 1798
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 24.2 bits (50), Expect = 0.71
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Frame = +3
Query: 276 HQGLHGT-HLRHEVEQRVHNRQGHEGVHL---AAARQGHPPHH 392
H +H T H H H++ H AA + GH PHH
Sbjct: 423 HSHIHATPHHHHSHAATPHHQHSTPLAHSSYPAAIQIGHTPHH 465
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.4 bits (48), Expect = 1.2
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 300 LRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRR 434
++ E QR H+ Q H + A Q H +++ Q R Q R+
Sbjct: 133 IKQETLQRHHHLQNHHHHLQSTAVQDHHRPYQQQQQQQQRQQQRQ 177
Score = 20.6 bits (41), Expect = 8.8
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = +3
Query: 303 RHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQ 410
+ + +Q+ H + EGV A + RGA Q
Sbjct: 1226 QQQQQQQQHQAREREGVGAGIAETSAGTSNSRGAAQ 1261
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.6 bits (46), Expect = 2.2
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = -3
Query: 342 ALADYEHVVQPRGEGVSRGVLDVHNVEGAGCLSR 241
+L +Y HV P G S L + G C R
Sbjct: 506 SLTEYHHVAPPSGHHASSAPLLAATLAGGLCPHR 539
Score = 20.6 bits (41), Expect = 8.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 254 PAPSTLCTSRTPRDTPSPRG 313
P+P+ C S T SP+G
Sbjct: 745 PSPAEQCASTTTITARSPQG 764
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.2 bits (45), Expect = 2.9
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +1
Query: 247 ETSGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPR 369
E G F VH+ T F T + + + + YI L R
Sbjct: 268 EGFGDFQPVHVHKQTAIAFRTPTYRMQQVEQPVQVYIQLKR 308
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 22.2 bits (45), Expect = 2.9
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +1
Query: 247 ETSGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPR 369
E G F VH+ T F T + + + + YI L R
Sbjct: 268 EGFGDFQPVHVHKQTAIAFRTPTYRMQQVEQPVQVYIQLKR 308
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 6.7
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 98 PDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLG 220
PD L + LD+ +I +F NL +TG R +G
Sbjct: 447 PDALRDLALLKTLDLGENRISNFYNGSFRNLDQLTGLRLIG 487
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 20.6 bits (41), Expect = 8.8
Identities = 11/38 (28%), Positives = 15/38 (39%)
Frame = -3
Query: 240 DTMVPTRPKLRPPVIIHKFPDSNLMKSIIFVVAMSNWM 127
D+ P +P PP PDS + I + N M
Sbjct: 334 DSDTPPKPAPPPPPPSSSGPDSAKLDKIFDIATKENAM 371
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 20.6 bits (41), Expect = 8.8
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -2
Query: 355 CTPSCPCRL 329
C P C CRL
Sbjct: 67 CAPGCVCRL 75
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 20.6 bits (41), Expect = 8.8
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -2
Query: 355 CTPSCPCRL 329
C P C CRL
Sbjct: 67 CAPGCVCRL 75
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,065
Number of Sequences: 438
Number of extensions: 3282
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -