Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0813
         (431 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    28   0.033
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    28   0.033
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   0.94 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   0.94 
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   1.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   1.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   2.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   2.9  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   3.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   3.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   3.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   3.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   3.8  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   3.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   6.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   6.6  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 28.3 bits (60), Expect = 0.033
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +3

Query: 90  LNKIAEFQHALEK*QTS*NLNFGPVIRMRFGVVFYV 197
           LNKI    H L K     N  FG V+ + FGV F V
Sbjct: 502 LNKICALHHHLSKLVKLFNETFGIVLLLMFGVSFVV 537


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 28.3 bits (60), Expect = 0.033
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +3

Query: 90  LNKIAEFQHALEK*QTS*NLNFGPVIRMRFGVVFYV 197
           LNKI    H L K     N  FG V+ + FGV F V
Sbjct: 227 LNKICALHHHLSKLVKLFNETFGIVLLLMFGVSFVV 262


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 0.94
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 166  ITGPKFKF*LVCYFSN 119
            +  PK +F +VCYF+N
Sbjct: 1816 LVDPKSEFKVVCYFTN 1831


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.4 bits (48), Expect = 0.94
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 134 LLFFQCVLKFGNFI*SVYTTVIKEN 60
           L  F  VL  G+FI SVY T   +N
Sbjct: 37  LTSFSVVLSLGSFIVSVYLTTKIDN 61


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 13  KNRTSFVFNNVLISS*FSFITVVYT 87
           +N +SFV  NVL      + TVV+T
Sbjct: 98  ENNSSFVVANVLFQLIHVYYTVVFT 122


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 176 SHSYHWSEIQILTCLLFF-QCVLKFGNFI*SVYTTVIK 66
           S S+H +EI I   L+FF +  L   N+   V TT  K
Sbjct: 53  SKSFHRNEIHIKIVLMFFKEASLYCFNYYVIVVTTFYK 90


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 13  KNRTSFVFNNVLISS*FSFITVVYT 87
           +N +SFV  NVL      + TVV+T
Sbjct: 98  ENNSSFVVANVLFQLIHVYYTVVFT 122


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 13  KNRTSFVFNNVLISS*FSFITVVYT 87
           +N +SFV  NVL      + TVV+T
Sbjct: 418 ENNSSFVVANVLFQLIHVYYTVVFT 442


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/44 (20%), Positives = 22/44 (50%)
 Frame = -3

Query: 261 CHATGTWSYNYIFVNTVKLGVIHKKLPQISFVSLVRNSNSNLFA 130
           C   GT+  ++ + N   +  +H++  +I+  SL    + N ++
Sbjct: 217 CQIRGTFFVSHKYTNYSAVQDLHRRGHEIAVFSLTHKEDPNYWS 260


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/44 (20%), Positives = 22/44 (50%)
 Frame = -3

Query: 261 CHATGTWSYNYIFVNTVKLGVIHKKLPQISFVSLVRNSNSNLFA 130
           C   GT+  ++ + N   +  +H++  +I+  SL    + N ++
Sbjct: 224 CQIRGTFFVSHKYTNYSAVQDLHRRGHEIAVFSLTHKEDPNYWS 267


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 276 TYNYGNVKVMRIKSNDSLLAPNLK 347
           T  Y NV V +I +ND +L   +K
Sbjct: 24  TNKYDNVDVDKILNNDRVLTNYIK 47


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 191 KNYPKSHSYHWSEIQILTCLLFFQCVL 111
           +N  +S  + +  + +  CLLFF  VL
Sbjct: 289 ENLEQSRYFIYMFVSVWKCLLFFVSVL 315


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 191 KNYPKSHSYHWSEIQILTCLLFFQCVL 111
           +N  +S  + +  + +  CLLFF  VL
Sbjct: 289 ENLEQSRYFIYMFVSVWKCLLFFVSVL 315


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 191 KNYPKSHSYHWSEIQILTCLLFFQCVL 111
           +N  +S  + +  + +  CLLFF  VL
Sbjct: 289 ENLEQSRYFIYMFVSVWKCLLFFVSVL 315


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 191 KNYPKSHSYHWSEIQILTCLLFFQCVL 111
           +N  +S  + +  + +  CLLFF  VL
Sbjct: 289 ENLEQSRYFIYMFVSVWKCLLFFVSVL 315


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 158 TSDTNEIWGSFLCITPNLTVFTN 226
           T D  ++W  F C+T  + V  N
Sbjct: 31  TLDDRDLWLRFECLTNEMIVTKN 53


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -3

Query: 273 Q*IRCHATGTWSYNYIFVNTVKLGVIHK 190
           Q I    T  W+YN +FV  +   + ++
Sbjct: 215 QTINLQITFIWTYNDLFVMLISTALAYR 242


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -3

Query: 273 Q*IRCHATGTWSYNYIFVNTVKLGVIHK 190
           Q I    T  W+YN +FV  +   + ++
Sbjct: 215 QTINLQITFIWTYNDLFVMLISTALAYR 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,686
Number of Sequences: 336
Number of extensions: 2000
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)