Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0813
         (431 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g38440.1 68417.m05432 expressed protein                             30   0.78 
At1g78370.1 68414.m09133 glutathione S-transferase, putative sim...    28   3.1  

>At4g38440.1 68417.m05432 expressed protein
          Length = 1465

 Score = 29.9 bits (64), Expect = 0.78
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = -3

Query: 387 SYEKRYHKTLIG*FSNLGPKASHLILFS*P*RYRNYKSQ*IRCHATGTWSYNYI 226
           S+EK   K LI  F+++  +A +L+L +      N  SQ I  + +GTW ++Y+
Sbjct: 708 SFEKLREKNLISEFTSVSNEA-YLVLEAFAETLPNMYSQNIPRNESGTWDWSYV 760


>At1g78370.1 68414.m09133 glutathione S-transferase, putative
           similar to 2,4-D inducible glutathione S-transferase
           GI:2920666 from [Glycine max]
          Length = 217

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 215 LLN*ELYIKNYPKSHSYHWSEIQILTCLLFFQCVLKFGNF 96
           +L  EL  K Y    S+ + +I ++T   +FQ   KFGNF
Sbjct: 134 ILESELGDKPYFGGDSFGYVDISLITFSSWFQAYEKFGNF 173


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,353,170
Number of Sequences: 28952
Number of extensions: 152889
Number of successful extensions: 266
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 685039728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)