Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0812
         (733 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XLE5 Cluster: Putative uncharacterized protein; n=1; ...    36   1.0  
UniRef50_Q7RTF4 Cluster: Putative uncharacterized protein PY0004...    35   2.4  
UniRef50_Q1YYI5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_Q4YQC5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_UPI0000DC12DE Cluster: UPI0000DC12DE related cluster; n...    33   9.5  

>UniRef50_Q4XLE5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 153

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
 Frame = +2

Query: 62  IYSVCSI--SKIHFSILYYIL----YFGATKKYLFLSHYEYKSERFLYTYHTEYIFVF-T 220
           IYS+  I  S IHF ILYYIL     +      +F S +++  + F +T+   Y F+F T
Sbjct: 20  IYSLIMIFISVIHFIILYYILLKNMLYNEYNTIIFYSIFKFILDIFYFTFFVIYTFLFNT 79

Query: 221 NYLSSVPS 244
           N +  + S
Sbjct: 80  NCIDKIAS 87


>UniRef50_Q7RTF4 Cluster: Putative uncharacterized protein PY00040;
            n=9; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY00040 - Plasmodium yoelii yoelii
          Length = 5229

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +2

Query: 164  YKSERFLYTYHTEYIFVFTNYLSSVPSVYLDRNIEQIE 277
            Y    +LYTY  +Y F F NY   V S YL++N+++I+
Sbjct: 2246 YDLNYYLYTYLYKYTFFFYNYNEHV-SFYLNKNVKEIQ 2282


>UniRef50_Q1YYI5 Cluster: Putative uncharacterized protein; n=1;
           Photobacterium profundum 3TCK|Rep: Putative
           uncharacterized protein - Photobacterium profundum 3TCK
          Length = 185

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +2

Query: 68  SVCSISKIHFSILYYILYFGATKKYLFLSHYE 163
           S+ +I K  F+I++ IL+FG   ++L   HYE
Sbjct: 153 SIFTILKSGFTIVFIILFFGGVVRFLIAKHYE 184


>UniRef50_Q4YQC5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 123

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +2

Query: 101 ILY-YILYF-GATK-KYLFLSHYEYKSERFLYTYHTEYIFVFTNY 226
           I+Y YILYF   TK KY+FLS Y +      +T+   YI+ F N+
Sbjct: 15  IIYNYILYFHNFTKQKYIFLSLYLFNMLFTFFTFFAFYIYFFLNH 59


>UniRef50_UPI0000DC12DE Cluster: UPI0000DC12DE related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC12DE UniRef100 entry -
           Rattus norvegicus
          Length = 381

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 18/55 (32%), Positives = 30/55 (54%)
 Frame = +2

Query: 89  IHFSILYYILYFGATKKYLFLSHYEYKSERFLYTYHTEYIFVFTNYLSSVPSVYL 253
           I+ SI+Y  +Y  +    ++ S Y      +L TY   Y+ +  +YLS+ PS+YL
Sbjct: 291 IYLSIIYLPMYHLSIHPSIYPSIYHI----YLSTYPXIYLSIHPSYLSTYPSIYL 341


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,102,027
Number of Sequences: 1657284
Number of extensions: 10582027
Number of successful extensions: 23983
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23869
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)