Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0812
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   1.9  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   2.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   2.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 155 HYEYKSERFLYTYHTEYIFVFTNYLS 232
           H+ +KS + LYT  T + ++F   LS
Sbjct: 54  HFTFKSWKVLYTSLTSFGYLFCASLS 79


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
 Frame = +2

Query: 86  KIHFSILYYILYFG----ATKKYLFLSHYEYKSERFLYT 190
           KI   I  Y LYF     +T   LFL HYE  + + L T
Sbjct: 212 KILLMIQLYYLYFDVIVISTFLQLFLEHYEVINRQTLDT 250


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
 Frame = +2

Query: 86  KIHFSILYYILYFG----ATKKYLFLSHYEYKSERFLYT 190
           KI   I  Y LYF     +T   LFL HYE  + + L T
Sbjct: 138 KILLMIQLYYLYFDVIVISTFLQLFLEHYEVINRQTLDT 176


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 475 ILVYVWV*LLFFESALLIYI 534
           + V VW  LLFF S L I +
Sbjct: 300 MFVSVWKCLLFFVSVLFILL 319


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 475 ILVYVWV*LLFFESALLIYI 534
           + V VW  LLFF S L I +
Sbjct: 300 MFVSVWKCLLFFVSVLFILL 319


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 475 ILVYVWV*LLFFESALLIYI 534
           + V VW  LLFF S L I +
Sbjct: 300 MFVSVWKCLLFFVSVLFILL 319


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 475 ILVYVWV*LLFFESALLIYI 534
           + V VW  LLFF S L I +
Sbjct: 300 MFVSVWKCLLFFVSVLFILL 319


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,757
Number of Sequences: 336
Number of extensions: 3387
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)