Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0812
         (733 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113401-1|AAM29406.1|  513|Drosophila melanogaster RE10234p pro...    29   6.5  
AY070598-1|AAL48069.1|  513|Drosophila melanogaster RE69954p pro...    29   6.5  
AY058601-1|AAL13830.1| 1148|Drosophila melanogaster LD29239p pro...    29   6.5  
AE014298-2906|AAF48996.2| 2111|Drosophila melanogaster CG14215-P...    29   6.5  
AE014296-86|AAF47377.1|  513|Drosophila melanogaster CG17084-PA ...    29   6.5  

>AY113401-1|AAM29406.1|  513|Drosophila melanogaster RE10234p
           protein.
          Length = 513

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 12/48 (25%), Positives = 27/48 (56%)
 Frame = +1

Query: 106 ILYTLFWRYEKVFISLTLRI*IRKVFIYLSYRIHFCFYELSFFSSICV 249
           I+ T F+ +    + +   + IR++ +Y+  R+   F+ + F+S IC+
Sbjct: 404 IVKTHFYAFSAYIVGV-FAVWIREIVVYIMARVREHFFIIDFWSGICI 450


>AY070598-1|AAL48069.1|  513|Drosophila melanogaster RE69954p
           protein.
          Length = 513

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 12/48 (25%), Positives = 27/48 (56%)
 Frame = +1

Query: 106 ILYTLFWRYEKVFISLTLRI*IRKVFIYLSYRIHFCFYELSFFSSICV 249
           I+ T F+ +    + +   + IR++ +Y+  R+   F+ + F+S IC+
Sbjct: 404 IVKTHFYAFSAYIVGV-FAVWIREIVVYIMARVREHFFIIDFWSGICI 450


>AY058601-1|AAL13830.1| 1148|Drosophila melanogaster LD29239p
           protein.
          Length = 1148

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = -3

Query: 257 DLNTQMELKKDNS*KQKCILYDRYIKTFLIYIRSVREINTFS*RQNKV 114
           +L  Q +L  +   K+ C++ +R ++    Y+RS+RE ++    Q +V
Sbjct: 122 NLQDQRQLGTERPNKRPCLMVERMVEDVKDYVRSIREKSSNQMEQEEV 169


>AE014298-2906|AAF48996.2| 2111|Drosophila melanogaster CG14215-PA
            protein.
          Length = 2111

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = -3

Query: 257  DLNTQMELKKDNS*KQKCILYDRYIKTFLIYIRSVREINTFS*RQNKV 114
            +L  Q +L  +   K+ C++ +R ++    Y+RS+RE ++    Q +V
Sbjct: 1085 NLQDQRQLGTERPNKRPCLMVERMVEDVKDYVRSIREKSSNQMEQEEV 1132


>AE014296-86|AAF47377.1|  513|Drosophila melanogaster CG17084-PA
           protein.
          Length = 513

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 12/48 (25%), Positives = 27/48 (56%)
 Frame = +1

Query: 106 ILYTLFWRYEKVFISLTLRI*IRKVFIYLSYRIHFCFYELSFFSSICV 249
           I+ T F+ +    + +   + IR++ +Y+  R+   F+ + F+S IC+
Sbjct: 404 IVKTHFYAFSAYIVGV-FAVWIREIVVYIMARVREHFFIIDFWSGICI 450


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,890,067
Number of Sequences: 53049
Number of extensions: 459097
Number of successful extensions: 683
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)