Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0811
         (705 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1347 + 35837967-35838060,35838524-35838783                       31   1.2  
04_01_0420 - 5561632-5563908                                           29   2.7  
11_04_0426 - 17573681-17574010,17574163-17574282,17574382-175747...    29   4.8  
02_05_0226 + 26971851-26972034,26972734-26972834,26972876-269729...    29   4.8  
03_01_0046 - 384444-384460,384649-384770,385144-385301,385379-38...    28   6.3  

>02_05_1347 + 35837967-35838060,35838524-35838783
          Length = 117

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +2

Query: 557 ATSPTPSLTSSHRPCQPLLPITGPQSTGFGIYLL 658
           A SPT  L+SSH+PC+  L  T    T  G Y L
Sbjct: 2   AASPTRLLSSSHQPCKESLHCTATGRTWAGEYEL 35


>04_01_0420 - 5561632-5563908
          Length = 758

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 102 LVTNQVASAIENIRKQIREAGFDPLDVDRREIVIPP 209
           LVT   A+ +   R+     G  PL+V R E+V PP
Sbjct: 661 LVTLTAAAPVATARRTATNIGKQPLEVYRAEVVAPP 696


>11_04_0426 -
           17573681-17574010,17574163-17574282,17574382-17574754,
           17575051-17575087,17575821-17575872
          Length = 303

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 23/65 (35%), Positives = 31/65 (47%)
 Frame = +3

Query: 48  ASTQTFDEQTEINARQERLVTNQVASAIENIRKQIREAGFDPLDVDRREIVIPPEEDFHA 227
           A+T T D+       +E +V     SA  ++ K  RE    P+DV+      PPEED  A
Sbjct: 229 AATATGDDDHSAAGVKEHVVNIAKLSAAVDVVKT-REV--HPVDVESPPAEAPPEEDDKA 285

Query: 228 LAAFA 242
            AA A
Sbjct: 286 AAATA 290


>02_05_0226 + 26971851-26972034,26972734-26972834,26972876-26972978,
            26973335-26973477,26973525-26973605,26973929-26974015,
            26974097-26974239,26974746-26974896,26974973-26975095,
            26975362-26975445,26975531-26975718,26976726-26976900,
            26977008-26977129,26977231-26977310,26977532-26977590,
            26977921-26978075,26978680-26978858,26980050-26980162,
            26980243-26980413,26980552-26980680,26980756-26980856,
            26980942-26981059,26981739-26981818,26983230-26983302,
            26983865-26983950,26984025-26984076,26984221-26984352,
            26984560-26984628,26984912-26985004,26985806-26985901,
            26986710-26986808,26986894-26986986,26987459-26987608,
            26988391-26988549
          Length = 1323

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +1

Query: 88   HVKSAWSLTRLLPPSKISESK*EKPDSIHWTLIEEKLSSLQRKTSM 225
            H  +++S++ L+PPSK+   K EK  S     I E+L    R T +
Sbjct: 1056 HAPASYSISYLIPPSKVDNDK-EKGVSSGRKSISERLDDEVRDTKI 1100


>03_01_0046 -
           384444-384460,384649-384770,385144-385301,385379-385479,
           385748-385823,385983-386093,386165-386356,386729-387024,
           388299-388497
          Length = 423

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = -2

Query: 221 EVFLWRDDNFSSINVQWIESGFSYLLSDIFDGGSNLVSDQALLTCVYLRLFIKSLCTGTS 42
           ++F+W   NF  +N Q ++S   Y+    FDG    V ++  + C  +   I    TG+S
Sbjct: 76  QLFIWFQFNFI-VNSQALKS---YIWLQCFDGSIQQVEEEVAMFCPMICREIVKNGTGSS 131

Query: 41  QN 36
           +N
Sbjct: 132 KN 133


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,535,585
Number of Sequences: 37544
Number of extensions: 350984
Number of successful extensions: 904
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)