Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0809
(773 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 33 0.23
U29535-3|AAK31458.1| 556|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical pr... 33 0.30
AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribo... 33 0.30
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 31 0.69
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z70783-11|CAA94860.2| 782|Caenorhabditis elegans Hypothetical p... 31 0.91
AF025471-1|AAB71058.1| 379|Caenorhabditis elegans Hypothetical ... 31 0.91
Z81449-9|CAB03760.3| 700|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81449-8|CAI70399.1| 705|Caenorhabditis elegans Hypothetical pr... 31 1.2
X64415-2|CAA45761.1| 700|Caenorhabditis elegans unc-93 protein. 31 1.2
X64415-1|CAA45760.1| 705|Caenorhabditis elegans unc-93 protein. 31 1.2
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 31 1.2
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 30 1.6
AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian el... 30 1.6
Z81544-7|CAB04432.2| 551|Caenorhabditis elegans Hypothetical pr... 30 2.1
L14730-1|AAB37563.2| 351|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL023844-6|CAA19532.1| 551|Caenorhabditis elegans Hypothetical ... 29 2.8
AL132952-7|CAB61139.2| 670|Caenorhabditis elegans Hypothetical ... 29 3.7
Z71185-6|CAI46563.1| 286|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z70279-6|CAA94244.2| 720|Caenorhabditis elegans Hypothetical pr... 29 4.9
U13876-13|AAA21172.3| 370|Caenorhabditis elegans Prion-like-(q/... 29 4.9
AL031269-2|CAA20332.1| 299|Caenorhabditis elegans Hypothetical ... 29 4.9
AL023841-4|CAC42359.1| 720|Caenorhabditis elegans Hypothetical ... 29 4.9
U41036-1|AAA82384.1| 315|Caenorhabditis elegans Hypothetical pr... 28 6.4
U23529-4|AAK39164.2| 545|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical ... 28 6.4
U58751-8|AAB00659.2| 635|Caenorhabditis elegans Hypothetical pr... 28 8.5
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 8.5
AF098989-2|AAK18954.3| 346|Caenorhabditis elegans Hypothetical ... 28 8.5
AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl pe... 28 8.5
AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl pe... 28 8.5
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 33.1 bits (72), Expect = 0.23
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Frame = -3
Query: 753 VKVTMSNAVKNTEKTTVGVDCLHISSCVTVQGLVVTTPPGPSRI-QTGNPVGSATSL-SS 580
V T S A +T ++ G +SS T G V +T S T + GS +L SS
Sbjct: 1752 VSSTASPAASSTAPSSTGT----MSS--TSSGTVGSTMSQSSTAASTTSHTGSTVTLGSS 1805
Query: 579 SVTDNVRAQAEANQVDSTPIAASVLMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQSTTI 400
S + N + ++ + V ST +++ + T +P + T+G+ + + ++ STT
Sbjct: 1806 STSSNQMSTSQGSSVGSTVASSTAGLVSTSTVPSSTGTMGSTSSGTVGSTIS--ESSTTA 1863
Query: 399 TLQSETAS 376
+ S+T S
Sbjct: 1864 SASSQTGS 1871
>U29535-3|AAK31458.1| 556|Caenorhabditis elegans Hypothetical
protein C25H3.6a protein.
Length = 556
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -3
Query: 663 QGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASVLMSQTKK 487
+G+ TP G TG P GS L S + +++ + +STP+AASV+++ K
Sbjct: 113 RGITPNTPAGRRVTSTGLP-GSQQRLVSPANGSYAPRSQVSPGESTPVAASVVVNGMHK 170
>Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical
protein E02H1.4 protein.
Length = 538
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 363 SAPPCWPSPTATLLLWTGVVLPTVYTTLPS-MEFPVSDSSLATFWSG 500
+A P P PT LLW G + V++ L + ++FPV D F +G
Sbjct: 370 TAAPTVPPPTTKRLLWHGTRVTNVFSILMNGLQFPVGDRCGLMFGNG 416
>AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-2 protein.
Length = 538
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 363 SAPPCWPSPTATLLLWTGVVLPTVYTTLPS-MEFPVSDSSLATFWSG 500
+A P P PT LLW G + V++ L + ++FPV D F +G
Sbjct: 370 TAAPTVPPPTTKRLLWHGTRVTNVFSILMNGLQFPVGDRCGLMFGNG 416
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 31.5 bits (68), Expect = 0.69
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = -3
Query: 618 TGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASVLMSQTKKLPRNCPTLGTPLTAVL 439
T + +GSA+ LSS T + + AN+ + AA+ + S R + T A
Sbjct: 2320 THHHIGSASGLSSQATIIASSSSSANESLQSRQAATSVTSANSGRTRGVRSYYTEEAAAR 2379
Query: 438 YRPLARPRQSTTITLQSETASKA 370
R P + +++L+ ET A
Sbjct: 2380 ARAFGIPPEMASLSLRMETTQNA 2402
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 31.5 bits (68), Expect = 0.69
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = -3
Query: 618 TGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASVLMSQTKKLPRNCPTLGTPLTAVL 439
T + +GSA+ LSS T + + AN+ + AA+ + S R + T A
Sbjct: 2320 THHHIGSASGLSSQATIIASSSSSANESLQSRQAATSVTSANSGRTRGVRSYYTEEAAAR 2379
Query: 438 YRPLARPRQSTTITLQSETASKA 370
R P + +++L+ ET A
Sbjct: 2380 ARAFGIPPEMASLSLRMETTQNA 2402
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 31.5 bits (68), Expect = 0.69
Identities = 27/120 (22%), Positives = 44/120 (36%)
Frame = -3
Query: 657 LVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASVLMSQTKKLPR 478
+ V T P P T P + T+ + + + A +TP A V + + P
Sbjct: 484 VTVPTTPTPVPTTTNTPPANPTTATPTTVGTIGTSPTAPANLTTPTTAPVNPTSSTTAPT 543
Query: 477 NCPTLGTPLTAVLYRPLARPRQSTTITLQSETASKAGRIMVFTAEFPLLFQPWTITKRGR 298
+P TA P+ +TT + + T + T P++ P TIT R
Sbjct: 544 APVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQT-TPTTPVVTTPSTITPTTR 602
>Z70783-11|CAA94860.2| 782|Caenorhabditis elegans Hypothetical
protein ZK856.12 protein.
Length = 782
Score = 31.1 bits (67), Expect = 0.91
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Frame = -3
Query: 735 NAVKNTEKTTVGVD-CLH-ISSCVTVQGLVVTTPPGPSR-IQTGNPVGSATSLSSSVTDN 565
N V ++ T+ +D C + +S + + PP + + + + +GS+ +S+S+ ++
Sbjct: 334 NPVASSHPTSSSMDDCPYGRASIARAKDYQLRLPPHSQKGLSSSSLLGSSYPVSNSIKND 393
Query: 564 VRAQAEANQVDSTPIAASVLMSQTKKL-PRN 475
+ Q+E+N+ D+T I+ S S + P+N
Sbjct: 394 ITKQSESNRADATNISFSSFESTKSDISPQN 424
>AF025471-1|AAB71058.1| 379|Caenorhabditis elegans Hypothetical
protein R52.3 protein.
Length = 379
Score = 31.1 bits (67), Expect = 0.91
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 361 DPPRLAGRLRLQRY--CCGLAWSCQRSIQHCRQWSSQC 468
D +A ++R+ +Y C G+ CQ+ I R+WS +C
Sbjct: 114 DHYNIAWKIRILKYEECLGIYLDCQKEIYEGRKWSIKC 151
>Z81449-9|CAB03760.3| 700|Caenorhabditis elegans Hypothetical
protein C46F11.1b protein.
Length = 700
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 293 GNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNG 457
G +PLFV G N V M+ P A + +V G+A+G++NT +NG
Sbjct: 557 GRMPLFVF--GAVVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQING 609
>Z81449-8|CAI70399.1| 705|Caenorhabditis elegans Hypothetical
protein C46F11.1a protein.
Length = 705
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 293 GNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNG 457
G +PLFV G N V M+ P A + +V G+A+G++NT +NG
Sbjct: 562 GRMPLFVF--GAVVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQING 614
>X64415-2|CAA45761.1| 700|Caenorhabditis elegans unc-93 protein.
Length = 700
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 293 GNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNG 457
G +PLFV G N V M+ P A + +V G+A+G++NT +NG
Sbjct: 557 GRMPLFVF--GAVVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQING 609
>X64415-1|CAA45760.1| 705|Caenorhabditis elegans unc-93 protein.
Length = 705
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 293 GNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNG 457
G +PLFV G N V M+ P A + +V G+A+G++NT +NG
Sbjct: 562 GRMPLFVF--GAVVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQING 614
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/102 (26%), Positives = 42/102 (41%)
Frame = +3
Query: 228 NQNNHQVITMAMSTLSGTRTTMETCXXXXXXXXXXXXXXPL*TP*SAPPCWPSPTATLLL 407
+QN + VIT ST S T + C P +P +T ++
Sbjct: 302 DQNVNSVITSDNSTYSDVHTAPQACNKNIIQTDCPVCSTA--APVVCTTASSAPASTAVV 359
Query: 408 WTGVVLPTVYTTLPSMEFPVSDSSLATFWSGSSTRRRQLGSS 533
T + + TV TT+ S+ S ++ T +G+ T QL SS
Sbjct: 360 TTTMPVTTVQTTVTSIGTSTSPQAVVT-TTGNPTTTAQLSSS 400
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/101 (23%), Positives = 39/101 (38%)
Frame = -3
Query: 744 TMSNAVKNTEKTTVGVDCLHISSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDN 565
T + A TE T+ D S T + +T T + S T +S+ TD+
Sbjct: 191 TTTTATSTTESTSTSTDSTTTES--TTESTTESTSTSTDSTTTESTTESTTESTSTSTDS 248
Query: 564 VRAQAEANQVDSTPIAASVLMSQTKKLPRNCPTLGTPLTAV 442
++ + DST S S T+ + + T L A+
Sbjct: 249 TTTESTSTSTDST-TTESTTESTTESTSTSTDSTTTSLPAL 288
>AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian
elks/cast/erc/rab6 interactingprotein homolog protein 1
protein.
Length = 836
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 165 EEDILMSRNGANNQYWLFTRRNQNNHQVITMAM 263
EE+++ R G +NQ FT +N + H++ TM M
Sbjct: 310 EEELMRQRMGRSNQPRDFTDKNLSGHEMATMRM 342
>Z81544-7|CAB04432.2| 551|Caenorhabditis elegans Hypothetical
protein F49C5.3 protein.
Length = 551
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -2
Query: 745 HHEQCGQ--KYREDHRRCGLPPHKLLRYGSG 659
HH + GQ K+RE H+R P +++R+ +G
Sbjct: 502 HHLKWGQVRKFREQHQRMETSPEEMIRFATG 532
>L14730-1|AAB37563.2| 351|Caenorhabditis elegans Hypothetical
protein C13G5.2 protein.
Length = 351
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 619 LDPAGPRWGGNNQALNRNAGAYV-EAIHTDGGLLGIFDR 732
L+P+G + G AL+RNA YV + +L IFD+
Sbjct: 100 LEPSGHGFRGGIAALSRNASHYVISTVGRSSNILNIFDK 138
>AL023844-6|CAA19532.1| 551|Caenorhabditis elegans Hypothetical
protein Y48A6B.8 protein.
Length = 551
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -2
Query: 745 HHEQCGQ--KYREDHRRCGLPPHKLLRYGSG 659
HH + GQ K+RE H+R P +++R+ +G
Sbjct: 502 HHLKWGQVRKFREQHQRMETSPEEVIRFATG 532
>AL132952-7|CAB61139.2| 670|Caenorhabditis elegans Hypothetical
protein Y51H4A.7 protein.
Length = 670
Score = 29.1 bits (62), Expect = 3.7
Identities = 27/104 (25%), Positives = 37/104 (35%), Gaps = 1/104 (0%)
Frame = +1
Query: 352 EHHDPPRLAGRLR-LQRYCCGLAWSCQRSIQHCRQWSSQCRTVPWQLFGLAHQHGGGNWG 528
+HHD R G A++ ++Q+C R W H GG WG
Sbjct: 540 DHHDVSGTDSPFRETSNVYDGSAFTADMAVQNCI--GDSFRGATWVAL---HNGGGVGWG 594
Query: 529 RVHLIGFSLGAHVVGNAGRQAGGRPNRVTGLDPAGPRWGGNNQA 660
V GF + +A R+A G N W GN +A
Sbjct: 595 DVINGGFGIVLDGSSDAARRAEGMLNWDVPNGVTRRSWSGNAKA 638
>Z71185-6|CAI46563.1| 286|Caenorhabditis elegans Hypothetical
protein C35A5.10 protein.
Length = 286
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 254 NGNVNSIRNSNYNGNL-PLFVIVHGWNSNGNSAVNTMI 364
N N N N+NYNGN P G+N+ G VN +
Sbjct: 121 NNNYNPYINNNYNGNYNPYGTSNGGYNAYGTIPVNVNV 158
>Z70279-6|CAA94244.2| 720|Caenorhabditis elegans Hypothetical
protein K11E8.1c protein.
Length = 720
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Frame = -3
Query: 624 IQTGNPVGSATSLSSSVTDNVRAQAEANQVDS--TPIAASVLMSQTKKLPRNCPTLGTPL 451
++T + GS S S+ D + ++Q S + +VL+ +K PRNC T
Sbjct: 314 LRTSDSTGSVASNGSTTHDASQVAGTSSQPTSPAAEVYPNVLLFNPQKFPRNCVHPFT-- 371
Query: 450 TAVLYRPLARPRQSTTITLQSETASKAGR 364
T Y P ++ TL E R
Sbjct: 372 THPYYSPKESSKKKLFFTLLFEVCPHTSR 400
>U13876-13|AAA21172.3| 370|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 46
protein.
Length = 370
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 236 QPSSYYNGNVNSIRNSNYNGN 298
Q +YN N N+ N+NYN N
Sbjct: 72 QQQQFYNNNNNNYNNNNYNNN 92
>AL031269-2|CAA20332.1| 299|Caenorhabditis elegans Hypothetical
protein VW02B12L.3 protein.
Length = 299
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = -1
Query: 650 LPPHLGPAGSKPVT-----LLGLPPACRPALPTTCAPKLK 546
LP G GS+PV + PP RPA P AP +K
Sbjct: 136 LPALKGSTGSRPVAAPARPVAAAPPKPRPAAPAVAAPAVK 175
>AL023841-4|CAC42359.1| 720|Caenorhabditis elegans Hypothetical
protein K11E8.1c protein.
Length = 720
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Frame = -3
Query: 624 IQTGNPVGSATSLSSSVTDNVRAQAEANQVDS--TPIAASVLMSQTKKLPRNCPTLGTPL 451
++T + GS S S+ D + ++Q S + +VL+ +K PRNC T
Sbjct: 314 LRTSDSTGSVASNGSTTHDASQVAGTSSQPTSPAAEVYPNVLLFNPQKFPRNCVHPFT-- 371
Query: 450 TAVLYRPLARPRQSTTITLQSETASKAGR 364
T Y P ++ TL E R
Sbjct: 372 THPYYSPKESSKKKLFFTLLFEVCPHTSR 400
>U41036-1|AAA82384.1| 315|Caenorhabditis elegans Hypothetical
protein T14E8.2 protein.
Length = 315
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 322 VDNNKERQVSIVVRVPDRVDIAIV 251
V NN++ Q +VV +PD+ D IV
Sbjct: 202 VQNNRKLQPGVVVHIPDKPDTGIV 225
>U23529-4|AAK39164.2| 545|Caenorhabditis elegans Hypothetical
protein C15B12.4 protein.
Length = 545
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 332 SNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSV 469
S+GNS+VN M + + S V+ +D G Y A NG+ V
Sbjct: 289 SDGNSSVNLMSNTNIESDSGLGVVHIDGAGQGTDNYVVASNGLKFV 334
>AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical
protein M01B12.4b protein.
Length = 644
Score = 28.3 bits (60), Expect = 6.4
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Frame = -3
Query: 726 KNTEKTTVGVDCL---HISSCVTVQGLVVTTPP-GPSRIQTGNPVGSATSLSSSVTDNVR 559
+ T T+ CL ++ S T G + TP P P ++ + S VT +
Sbjct: 127 QTTSPTSTTESCLNLRYVESNTTKMGRLSMTPQRAPPASHRPAPAMASMTTSMYVTSSAP 186
Query: 558 AQAEANQVDSTPIAASVLMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQSTTITLQ 391
+ +A + S P A + TKK+ G+ +T +Y P +RP S+ +T++
Sbjct: 187 STRQAKSI-SKPAAVT-----TKKV-------GSMMTQSVYTPTSRPATSSRLTMK 229
>U58751-8|AAB00659.2| 635|Caenorhabditis elegans Hypothetical
protein C07G1.2 protein.
Length = 635
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 768 FCTVGVKVTMSNAVKNTEKTTVGVDCLHISSCVTVQG 658
FC GVKV S ++ + +G CL IS+ V VQG
Sbjct: 92 FCKTGVKVFCSPSLCASGTLQIGSKCLSIST-VPVQG 127
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +1
Query: 511 GGGNWGRVHLIGFSLGAHVVGNAGRQAGGRPNRVTGLDPAGPRWGG 648
GGGNWG G + G GR GGR + + G WGG
Sbjct: 74 GGGNWGGNGGGRGDWGGN--GGGGRGGGGRGDWGGNNNGGGGNWGG 117
>AF098989-2|AAK18954.3| 346|Caenorhabditis elegans Hypothetical
protein F47G6.3 protein.
Length = 346
Score = 27.9 bits (59), Expect = 8.5
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = -3
Query: 642 PPGPSRIQTGNPVGSATSLSSSVTDNVRAQAE-ANQVDSTPIAASVLMSQTKKLPRNCPT 466
P S++QT + S+ S S + E + +VD P A +MS P+ P
Sbjct: 29 PKPKSKVQTAERIPSSKRRSKSGKKRGTKEKERSKEVDELPKTAGSVMSPAPNPPKFKPP 88
Query: 465 LGTPL-TAVLYRPLARPRQSTTITLQSETASKAGRIM 358
TP T P+ + ST +S+ + + GR +
Sbjct: 89 PSTPAKTNQTSTPVPTSKDST--GSKSKKSDEVGRAL 123
>AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform b protein.
Length = 927
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 311 VIVHGWNSNGNSAVNTMIR-PALLAVSDCNVIVVDWRGLANGLYNTAVNGVP 463
V+VHGW+ G A+ + + P + + V DWR L + Y G P
Sbjct: 774 VVVHGWSYGGYMALQMIAKHPNIYRAAIAGGAVSDWR-LYDTAYTERYMGYP 824
>AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform a protein.
Length = 931
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 311 VIVHGWNSNGNSAVNTMIR-PALLAVSDCNVIVVDWRGLANGLYNTAVNGVP 463
V+VHGW+ G A+ + + P + + V DWR L + Y G P
Sbjct: 778 VVVHGWSYGGYMALQMIAKHPNIYRAAIAGGAVSDWR-LYDTAYTERYMGYP 828
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,021,800
Number of Sequences: 27780
Number of extensions: 478014
Number of successful extensions: 1763
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1761
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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