Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0808
(713 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 48 7e-06
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 48 1e-05
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 33 0.23
08_02_1619 - 28283250-28285238 32 0.52
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 32 0.52
07_03_1173 - 24526632-24526755,24527057-24527226,24527441-245275... 30 1.6
05_06_0198 + 26300872-26301519,26302939-26303028,26303118-26303189 30 2.1
09_04_0131 + 14917239-14918510,14918803-14918895 29 2.8
12_01_0994 - 10077322-10077696,10078303-10078839,10079062-10079112 29 3.7
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 29 3.7
11_06_0679 - 26227654-26227770,26234067-26236217 29 4.8
01_06_1743 + 39601644-39602023,39602301-39602734,39602828-396030... 28 6.4
01_02_0028 - 10340253-10340619,10341110-10341615 28 6.4
12_02_0756 + 22839673-22839870,22839961-22842194,22842280-228425... 28 8.5
06_01_1136 + 9407282-9407663,9408075-9408227,9408336-9408539,940... 28 8.5
05_05_0290 - 23879064-23880035 28 8.5
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 48.0 bits (109), Expect = 7e-06
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +2
Query: 221 DVSTAASS-PRP*AYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIP 397
+VS A P YPG ++ + + ERA ++ + GS+T +P++ D++ P
Sbjct: 326 EVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGR--SGSITQIPILTMPNDDITHPTP 383
Query: 398 TNVISITDGQIFLETELFYKGIRPAINVGLSVSRV 502
IT+GQI+++ +L + I P INV S+SR+
Sbjct: 384 DLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRL 418
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 21 AQIVKR-LTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFR-DNGKHALIIYDDL 194
AQ KR + G++ + A+D + + P E+ + GKH L+I D+
Sbjct: 258 AQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDM 317
Query: 195 SKQAVAYRQMS 227
S A A R++S
Sbjct: 318 SSYADALREVS 328
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +2
Query: 221 DVSTAASS-PRP*AYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIP 397
+VS A P YPG ++ + + ERA ++ + G S+T +P++ D++ P
Sbjct: 296 EVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKG--SITQIPILTMPNDDITHPTP 353
Query: 398 TNVISITDGQIFLETELFYKGIRPAINVGLSVSRV 502
IT+GQI+++ +L + I P INV S+SR+
Sbjct: 354 DLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRL 388
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 21 AQIVKR-LTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFR-DNGKHALIIYDDL 194
AQ KR + G++ + A+D + + P E+ + GKH L+I D+
Sbjct: 228 AQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDM 287
Query: 195 SKQAVAYRQMS 227
S A A R++S
Sbjct: 288 SSYADALREVS 298
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 66 TIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMS 227
T +V+ T++ + + Y+G + E+FRD G + ++ D S+ A A R++S
Sbjct: 329 TTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREIS 382
>08_02_1619 - 28283250-28285238
Length = 662
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = -2
Query: 697 SSIAMGTYCPCLRSSVRRIPLLSSCCVAASKSEPNWAKAATHGTEPIPASWNRPPAS*PW 518
+ +A G P ++ + L CC + + P A+ E P + +RP A
Sbjct: 588 AEVARGVRSPAEEGLLQALKLAMGCCAPVASARPTMAEVVRQLEEVRPRNSSRPSAIYSP 647
Query: 517 SEQRSD 500
+E RSD
Sbjct: 648 AEPRSD 653
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 31.9 bits (69), Expect = 0.52
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +3
Query: 66 TIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMS 227
T +V+ T++ + + Y+G + E++RD G + ++ D S+ A A R++S
Sbjct: 315 TTLVANTSNMPVAAREASIYTGITIAEYYRDMGYNVSMMADSTSRWAEALREIS 368
>07_03_1173 -
24526632-24526755,24527057-24527226,24527441-24527506,
24527858-24527953,24528340-24528438,24528730-24528819,
24529016-24529111,24529561-24529654,24530254-24530351,
24530395-24530679
Length = 405
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 664 LRSSVRRIPLLSSCCVAASKSEPNWAKAATHGTEPIPASWNRP 536
L + R+P+ +SCC+ S N +K PI +S RP
Sbjct: 68 LAKRIERVPVQASCCLNPSPPPQNLSKMTGFSQSPILSSCVRP 110
>05_06_0198 + 26300872-26301519,26302939-26303028,26303118-26303189
Length = 269
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/62 (40%), Positives = 30/62 (48%)
Frame = +2
Query: 173 PYYLRRFVQTSRSLPSDVSTAASSPRP*AYPGDVFYLHSRLLERAAKMSDKMGGGSLTAL 352
P + RR VQT S SD + A S+P P P + SRLL AA + GG L L
Sbjct: 28 PRHRRRRVQTLSSSSSDAAAAPSTPPPVWPPASL----SRLL--AAALRGGRAGGELPDL 81
Query: 353 PV 358
V
Sbjct: 82 AV 83
>09_04_0131 + 14917239-14918510,14918803-14918895
Length = 454
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 114 LAPYSGCAMGEFFRDNGKHALIIYDDLSK 200
L Y+ F RDN KHAL+ Y DL K
Sbjct: 75 LYTYNALMSSHFKRDNIKHALVFYYDLLK 103
>12_01_0994 - 10077322-10077696,10078303-10078839,10079062-10079112
Length = 320
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 408 SPSLMDRSSWKLSCSTKVSDQPSTSVCLYRVSDL 509
S +L + W L C + SD PS RV+DL
Sbjct: 44 SLALEQSNGWSLHCGERASDSPSPRALPLRVADL 77
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = -2
Query: 640 PLLSSCCVAASKSEPNWAKAATHGTEPIPASWNRPPAS*P 521
PL + AAS S PN A T T P PAS P A+ P
Sbjct: 33 PLPLAPAAAASSSNPNATPADTTPTSPPPASPPLPSATPP 72
>11_06_0679 - 26227654-26227770,26234067-26236217
Length = 755
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 122 RSQVLQGSSIGSGGRHDDCVVDGTSISQS 36
R Q L ++G+GG D C + G QS
Sbjct: 63 RLQTLHNQTVGAGGSSDQCAIPGAREKQS 91
>01_06_1743 +
39601644-39602023,39602301-39602734,39602828-39603006,
39603636-39603716,39603828-39603914,39604000-39604006,
39604241-39604312,39604712-39604792,39605156-39605262
Length = 475
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2
Query: 610 SKSEPNWAKAATHGTEPIPASWNRPPAS*PWSEQRSDTRYRQ 485
S+ P +A AA GTEP P+ R P S RS R+RQ
Sbjct: 95 SRQVPRFAAAAAAGTEPSPSLDRRDPMS------RSARRHRQ 130
>01_02_0028 - 10340253-10340619,10341110-10341615
Length = 290
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 631 SSCCVAASKSEPNWAKAATHGTEPIPASWN 542
SS C A K P + + HG PI SWN
Sbjct: 141 SSYCDATDKQWPCYPGKSYHGRGPIQISWN 170
>12_02_0756 +
22839673-22839870,22839961-22842194,22842280-22842531,
22842612-22842722,22842812-22842893,22843168-22843359
Length = 1022
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -2
Query: 649 RRIPLLSSCCVAASKSEPNWAKAATHGTEPIPASWNRPPA 530
RR +LS+ +AA S P+ ++A T T P P S PP+
Sbjct: 540 RRDIILSAAVLAAGSSTPSSSQAMT-ATAPAPPSPPEPPS 578
>06_01_1136 +
9407282-9407663,9408075-9408227,9408336-9408539,
9408709-9409174,9409434-9409575
Length = 448
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 168 VCHYHGKIHPWHNQSKEP 115
VCHY+ +HP HN+ K+P
Sbjct: 242 VCHYN--VHPIHNELKDP 257
>05_05_0290 - 23879064-23880035
Length = 323
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 574 ESQLLPSSVLTWMPLHSSCSTEECVLLSSSSKD 672
E + S +L W+ LHSSC L S +KD
Sbjct: 218 EHKFHSSCILPWLELHSSCPVCRFELPSEETKD 250
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,401,727
Number of Sequences: 37544
Number of extensions: 486917
Number of successful extensions: 1426
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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