Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0808
(713 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 166 2e-41
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 166 2e-41
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 166 2e-41
Z82053-6|CAB04832.1| 106|Caenorhabditis elegans Hypothetical pr... 91 1e-18
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 47 2e-05
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 45 6e-05
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 34 0.12
U28928-1|AAA68334.3| 589|Caenorhabditis elegans Anchor cell fus... 29 2.5
EF205023-1|ABP04049.1| 589|Caenorhabditis elegans anchor cell f... 29 2.5
AF016450-8|AAB65993.1| 578|Caenorhabditis elegans Hypothetical ... 29 4.4
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 28 5.8
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 28 5.8
Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical pr... 28 7.6
AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trn... 28 7.6
AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trn... 28 7.6
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 166 bits (403), Expect = 2e-41
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +2
Query: 257 AYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL 436
AYPGDVFYLHSRLLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL
Sbjct: 294 AYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL 353
Query: 437 ETELFYKGIRPAINVGLSVSRVGS 508
ETELFYKG+RPAINVGLSVSRVGS
Sbjct: 354 ETELFYKGVRPAINVGLSVSRVGS 377
Score = 145 bits (352), Expect = 2e-35
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = +3
Query: 3 QKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALII 182
QKRSTVAQIVKRLTDAGA++YTI+VSATASDAAPLQ+LAPYSGCAMGE FRDNGKHALII
Sbjct: 209 QKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALII 268
Query: 183 YDDLSKQAVAYRQMS 227
+DDLSKQAVAYRQMS
Sbjct: 269 FDDLSKQAVAYRQMS 283
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = +3
Query: 576 VAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAII 713
VAAFAQFGSDLDA+TQQLLNRG+RLTELLKQGQYVPM IEEQV +I
Sbjct: 401 VAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVI 446
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +1
Query: 508 SAQTKAMKQVAGSMKLELAQYRE 576
+AQTKAMKQVAGSMKLELAQYRE
Sbjct: 378 AAQTKAMKQVAGSMKLELAQYRE 400
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 166 bits (403), Expect = 2e-41
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +2
Query: 257 AYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL 436
AYPGDVFYLHSRLLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL
Sbjct: 286 AYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL 345
Query: 437 ETELFYKGIRPAINVGLSVSRVGS 508
ETELFYKG+RPAINVGLSVSRVGS
Sbjct: 346 ETELFYKGVRPAINVGLSVSRVGS 369
Score = 145 bits (352), Expect = 2e-35
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = +3
Query: 3 QKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALII 182
QKRSTVAQIVKRLTDAGA++YTI+VSATASDAAPLQ+LAPYSGCAMGE FRDNGKHALII
Sbjct: 201 QKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALII 260
Query: 183 YDDLSKQAVAYRQMS 227
+DDLSKQAVAYRQMS
Sbjct: 261 FDDLSKQAVAYRQMS 275
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = +3
Query: 576 VAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAII 713
VAAFAQFGSDLDA+TQQLLNRG+RLTELLKQGQYVPM IEEQV +I
Sbjct: 393 VAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVI 438
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +1
Query: 508 SAQTKAMKQVAGSMKLELAQYRE 576
+AQTKAMKQVAGSMKLELAQYRE
Sbjct: 370 AAQTKAMKQVAGSMKLELAQYRE 392
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 166 bits (403), Expect = 2e-41
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +2
Query: 257 AYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL 436
AYPGDVFYLHSRLLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL
Sbjct: 321 AYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL 380
Query: 437 ETELFYKGIRPAINVGLSVSRVGS 508
ETELFYKG+RPAINVGLSVSRVGS
Sbjct: 381 ETELFYKGVRPAINVGLSVSRVGS 404
Score = 145 bits (352), Expect = 2e-35
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = +3
Query: 3 QKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALII 182
QKRSTVAQIVKRLTDAGA++YTI+VSATASDAAPLQ+LAPYSGCAMGE FRDNGKHALII
Sbjct: 236 QKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALII 295
Query: 183 YDDLSKQAVAYRQMS 227
+DDLSKQAVAYRQMS
Sbjct: 296 FDDLSKQAVAYRQMS 310
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = +3
Query: 576 VAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAII 713
VAAFAQFGSDLDA+TQQLLNRG+RLTELLKQGQYVPM IEEQV +I
Sbjct: 428 VAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVI 473
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +1
Query: 508 SAQTKAMKQVAGSMKLELAQYRE 576
+AQTKAMKQVAGSMKLELAQYRE
Sbjct: 405 AAQTKAMKQVAGSMKLELAQYRE 427
>Z82053-6|CAB04832.1| 106|Caenorhabditis elegans Hypothetical
protein T26E3.7 protein.
Length = 106
Score = 90.6 bits (215), Expect = 1e-18
Identities = 40/50 (80%), Positives = 48/50 (96%)
Frame = +3
Query: 57 INYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQA 206
++YTI+VSATASDAAPL++LAPYSGCA+GE F DNGKHALII+DDLSK+A
Sbjct: 1 MDYTIVVSATASDAAPLKFLAPYSGCAIGEHFLDNGKHALIIFDDLSKKA 50
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 46.8 bits (106), Expect = 2e-05
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +2
Query: 221 DVSTAASS-PRP*AYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIP 397
+VS A P +PG ++ + + ERA ++ + GS+T +P++ D++ IP
Sbjct: 289 EVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGR--DGSITQIPILTMPNDDITHPIP 346
Query: 398 TNVISITDGQIFLETELFYKGIRPAINVGLSVSRV 502
IT+GQI+++ +L + I P INV S+SR+
Sbjct: 347 DLTGYITEGQIYVDRQLHNRLIYPPINVLPSLSRL 381
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/81 (30%), Positives = 48/81 (59%)
Frame = +2
Query: 260 YPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE 439
+PG ++ + + ERA ++ + G S+T +P++ D++ IP IT+GQI+++
Sbjct: 315 FPGYMYTDLATIYERAGRVKGREG--SITQIPILTMPNNDITHPIPDLTGYITEGQIYID 372
Query: 440 TELFYKGIRPAINVGLSVSRV 502
+L + I P I+V S+SR+
Sbjct: 373 KQLHKRLIYPPIDVLPSLSRL 393
Score = 31.9 bits (69), Expect = 0.47
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 45 DAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDN-GKHALIIYDDLSKQAVAYRQ 221
+ G+++ + A+D + + P EFF + GKH L++ D+S A A R+
Sbjct: 242 ECGSMDNVCLFLNLANDPTIERIITPRIALTAAEFFAYHCGKHVLVVLTDMSSYAEALRE 301
Query: 222 MS 227
+S
Sbjct: 302 IS 303
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 66 TIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMS 227
T +V+ T++ + + Y+G + E+FRD G + ++ D S+ A A R++S
Sbjct: 298 TALVANTSNMPVAAREASIYTGITLAEYFRDMGLNVAMMADSTSRWAEALREIS 351
>U28928-1|AAA68334.3| 589|Caenorhabditis elegans Anchor cell fusion
failure protein1 protein.
Length = 589
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1
Query: 568 YRESQL-LPSSVLTWMPLHSSCSTEECVLLSSSSKDNMCPWLL 693
Y E + P +W HS CS EC L S D + PW++
Sbjct: 481 YEEKAMRTPRQEQSWSKGHSPCSQAECNSLKSGVSD-LFPWIM 522
>EF205023-1|ABP04049.1| 589|Caenorhabditis elegans anchor cell
fusion failure-1 protein.
Length = 589
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1
Query: 568 YRESQL-LPSSVLTWMPLHSSCSTEECVLLSSSSKDNMCPWLL 693
Y E + P +W HS CS EC L S D + PW++
Sbjct: 481 YEEKAMRTPRQEQSWSKGHSPCSQAECNSLKSGVSD-LFPWIM 522
>AF016450-8|AAB65993.1| 578|Caenorhabditis elegans Hypothetical
protein B0238.7 protein.
Length = 578
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 105 LQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQM 224
+ Y Y C M + F+ NG+ L IYDD++K + Y+Q+
Sbjct: 526 MYYKIDYPTCEMSDNFQ-NGR--LRIYDDINKNSKKYQQI 562
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +2
Query: 5 EEVYCSSNCEEI--D*CWCHQLHNHRVCHRFRCCSPAIPGSLLWLCHG 142
E+ Y + + D W + H++C RFRC S + L L G
Sbjct: 706 EKAYADKKWQHVSEDLAWLSDIKIHQLCERFRCTSKFLLNEQLALKSG 753
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +2
Query: 5 EEVYCSSNCEEI--D*CWCHQLHNHRVCHRFRCCSPAIPGSLLWLCHG 142
E+ Y + + D W + H++C RFRC S + L L G
Sbjct: 706 EKAYADKKWQHVSEDLAWLSDIKIHQLCERFRCTSKFLLNEQLALKSG 753
>Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical
protein F16A11.1 protein.
Length = 673
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 255 YGRGDDAAVETSDGRLRLVWTNRR 184
YG GDDA+ DG +LVW N +
Sbjct: 424 YGIGDDASSVAYDGCRQLVWYNAK 447
>AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform a protein.
Length = 909
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 683 GHILSLLEELSKTHSSVEQLLCSGIQVRTELGK 585
G L L+EE K S V + LC + R+ + K
Sbjct: 649 GKELKLMEEFGKLKSEVHEALCDSVDTRSVIEK 681
>AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform b protein.
Length = 908
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 683 GHILSLLEELSKTHSSVEQLLCSGIQVRTELGK 585
G L L+EE K S V + LC + R+ + K
Sbjct: 648 GKELKLMEEFGKLKSEVHEALCDSVDTRSVIEK 680
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,897,144
Number of Sequences: 27780
Number of extensions: 365281
Number of successful extensions: 950
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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