Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0808
(713 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial... 158 4e-39
At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putati... 48 8e-06
At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putati... 48 8e-06
At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATP... 48 8e-06
At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putati... 43 2e-04
At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit... 33 0.19
At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putati... 30 1.8
At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1, ... 29 4.0
At3g28520.1 68416.m03562 AAA-type ATPase family protein contains... 28 7.1
At2g29970.1 68415.m03645 heat shock protein-related contains sim... 28 7.1
At5g17760.1 68418.m02082 AAA-type ATPase family protein contains... 27 9.3
At5g17730.1 68418.m02079 AAA-type ATPase family protein contains... 27 9.3
At4g26380.1 68417.m03795 DC1 domain-containing protein contains ... 27 9.3
>At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial,
putative very strong similarity to SP|P23413 ATP
synthase alpha chain, mitochondrial (EC 3.6.3.14)
{Brassica campestris}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF00306: ATP synthase ab C terminal, PF02874:
ATP synthase alpha/beta family beta-barrel domain
Length = 777
Score = 158 bits (383), Expect = 4e-39
Identities = 77/84 (91%), Positives = 80/84 (95%)
Frame = +2
Query: 257 AYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL 436
A+PGDVFYLHSRLLERAAK SD+ G GSLTALPVIETQAGDVSAYIPTNVISITDGQI L
Sbjct: 566 AFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICL 625
Query: 437 ETELFYKGIRPAINVGLSVSRVGS 508
ETELFY+GIRPAINVGLSVSRVGS
Sbjct: 626 ETELFYRGIRPAINVGLSVSRVGS 649
Score = 128 bits (308), Expect = 5e-30
Identities = 58/75 (77%), Positives = 68/75 (90%)
Frame = +3
Query: 3 QKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALII 182
QKRSTV Q+++ L +A A+ Y+I+V+ATASD APLQ+LAPYSGCAMGE+FRDNG HALII
Sbjct: 481 QKRSTVGQLIQTLEEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 540
Query: 183 YDDLSKQAVAYRQMS 227
YDDLSKQAVAYRQMS
Sbjct: 541 YDDLSKQAVAYRQMS 555
Score = 72.1 bits (169), Expect = 3e-13
Identities = 34/46 (73%), Positives = 39/46 (84%)
Frame = +3
Query: 576 VAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAII 713
VAAFAQFGSDLDAATQ LLNRG RLTE+ KQ QY P+ IE+Q+ +I
Sbjct: 673 VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYAPLPIEKQILVI 718
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +1
Query: 508 SAQTKAMKQVAGSMKLELAQYRE 576
+AQ KAMKQV GS KLELAQYRE
Sbjct: 650 AAQLKAMKQVCGSSKLELAQYRE 672
>At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 47.6 bits (108), Expect = 8e-06
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +2
Query: 221 DVSTAASS-PRP*AYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIP 397
+VS A P YPG ++ + + ERA ++ + G S+T +P++ D++ P
Sbjct: 286 EVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKG--SITQIPILTMPNDDITHPTP 343
Query: 398 TNVISITDGQIFLETELFYKGIRPAINVGLSVSRV 502
IT+GQI+++ +L + I P INV S+SR+
Sbjct: 344 DLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRL 378
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 21 AQIVKR-LTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFR-DNGKHALIIYDDL 194
AQ KR + G++ + A+D + + P E+ + GKH L+I D+
Sbjct: 218 AQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDM 277
Query: 195 SKQAVAYRQMS 227
S A A R++S
Sbjct: 278 SSYADALREVS 288
>At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 47.6 bits (108), Expect = 8e-06
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +2
Query: 221 DVSTAASS-PRP*AYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIP 397
+VS A P YPG ++ + + ERA ++ + G S+T +P++ D++ P
Sbjct: 286 EVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKG--SITQIPILTMPNDDITHPTP 343
Query: 398 TNVISITDGQIFLETELFYKGIRPAINVGLSVSRV 502
IT+GQI+++ +L + I P INV S+SR+
Sbjct: 344 DLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRL 378
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 21 AQIVKR-LTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFR-DNGKHALIIYDDL 194
AQ KR + G++ + A+D + + P E+ + GKH L+I D+
Sbjct: 218 AQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDM 277
Query: 195 SKQAVAYRQMS 227
S A A R++S
Sbjct: 278 SSYADALREVS 288
>At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATPase
B subunit / vacuolar proton pump B subunit / V-ATPase 57
kDa subunit identical to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}
Length = 486
Score = 47.6 bits (108), Expect = 8e-06
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +2
Query: 221 DVSTAASS-PRP*AYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIP 397
+VS A P YPG ++ + + ERA ++ + G S+T +P++ D++ P
Sbjct: 285 EVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKG--SITQIPILTMPNDDITHPTP 342
Query: 398 TNVISITDGQIFLETELFYKGIRPAINVGLSVSRV 502
IT+GQI+++ +L + I P INV S+SR+
Sbjct: 343 DLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRL 377
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 21 AQIVKR-LTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFR-DNGKHALIIYDDL 194
AQ KR + G++ + A+D + + P E+ + GKH L+I D+
Sbjct: 217 AQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDM 276
Query: 195 SKQAVAYRQMS 227
S A A R++S
Sbjct: 277 SSYADALREVS 287
>At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 485
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 272 VFYLH-SRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETEL 448
V+Y + + ERA ++ + G S+T +P++ D++ P IT+GQI+++ +L
Sbjct: 301 VYYTDLATIYERAGRIEGRKG--SITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQL 358
Query: 449 FYKGIRPAINVGLSVSRV 502
+ I P INV S+SR+
Sbjct: 359 HNRQIYPPINVLPSLSRL 376
>At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit A
/ V-ATPase A subunit / vacuolar proton pump alpha
subunit / V-ATPase 69 kDa subunit identical to SP|O23654
Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)
(V-ATPase A subunit) (Vacuolar proton pump alpha
subunit) (V-ATPase 69 kDa subunit) {Arabidopsis
thaliana}
Length = 623
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 66 TIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMS 227
T +V+ T++ + + Y+G + E+FRD G + ++ D S+ A A R++S
Sbjct: 312 TTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREIS 365
>At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 330
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 21 AQIVKR-LTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFR-DNGKHALIIYDDL 194
AQ KR + G++ + A+D + + P E+ + GKH L+I D+
Sbjct: 218 AQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDM 277
Query: 195 SKQAVAYRQMS 227
S A A R++S
Sbjct: 278 SSYADALREVS 288
>At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1,
Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens,
EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849
contains Pfam profile: ATPase family PF00004
gene_id:K17E7.100 contains Pfam profile: ATPase family
PF00004
Length = 533
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +1
Query: 493 IACRISAQTKAMKQVAGSMKLELAQYRESQLLPSSVLTWMPLHSSCSTEECVLLSSSSKD 672
I C + T+ S L Q + L + L SSC E ++ ++++K+
Sbjct: 305 IDCSVDLPTRLQPPTETSQPLGAVQVSKPLTLSGLLNCIDGLWSSCGNERIIIFTTNNKE 364
Query: 673 NMCPWLLR 696
+ P LLR
Sbjct: 365 KLDPALLR 372
>At3g28520.1 68416.m03562 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 478
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 514 QTKAMKQVAGSMKLELAQYRESQLLPSSVLTWMP-LHSSCSTEECVLLSSSSKDNMCPWL 690
+ K K+ A ++K ++ ES + S +L + L S+CS E+ ++ +++ DN+ P L
Sbjct: 306 EDKEEKKEAENLK-RVSGNNESNVTLSGLLNAIDGLWSACSDEKIIIFTTNFVDNLDPAL 364
Query: 691 LR 696
+R
Sbjct: 365 IR 366
>At2g29970.1 68415.m03645 heat shock protein-related contains
similarity to 101 kDa heat shock protein; HSP101
[Triticum aestivum] gi|11561808|gb|AAC83689
Length = 1002
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 514 EQRSDTRYRQTD-VDGWSDTFVEQLSFQEDLSISDGDHVGRNVS*HITGL 368
E D Y ++ + W + FVEQ+ + + D D + +N+ +I L
Sbjct: 864 EANEDEAYTMSENTEAWLEDFVEQVDGKVTFKLIDFDELAKNIKRNILSL 913
>At5g17760.1 68418.m02082 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 505
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 493 IACRISAQTKAMKQVAGSMKLELAQYRESQLLPSSVLTWMP-LHSSCSTEECVLLSSSSK 669
I C + + + V G + E + L S +L ++ L SSC E ++ +++ K
Sbjct: 313 IDCAVDLPNRIEQPVEGKNRGE----SQGPLTLSGLLNFIDGLWSSCGDERIIIFTTNHK 368
Query: 670 DNMCPWLLR 696
D + P LLR
Sbjct: 369 DRLDPALLR 377
>At5g17730.1 68418.m02079 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 470
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 577 SQLLPSSVLTWMP-LHSSCSTEECVLLSSSSKDNMCPWLLR 696
S L S +LT + L SSC E V+ +++ K+ + P LLR
Sbjct: 327 SMLTLSGLLTCIDGLWSSCGDERIVIFTTTHKERLDPALLR 367
>At4g26380.1 68417.m03795 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 1016
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/65 (29%), Positives = 23/65 (35%)
Frame = +1
Query: 490 CIACRISAQTKAMKQVAGSMKLELAQYRESQLLPSSVLTWMPLHSSCSTEECVLLSSSSK 669
C+AC S K+ A YR L P +S + C L SSS
Sbjct: 580 CLACNFSMNVACTKKPA-------VLYRNHPRWHEHTLALFPRQASLTCNLCALADSSSP 632
Query: 670 DNMCP 684
MCP
Sbjct: 633 IYMCP 637
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,237,541
Number of Sequences: 28952
Number of extensions: 352690
Number of successful extensions: 1016
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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