Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0807
(799 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 36 0.034
U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical pr... 34 0.10
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 33 0.24
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 33 0.31
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 33 0.31
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 31 0.72
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 31 0.96
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 30 1.7
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 29 3.9
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 29 3.9
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 6.7
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 28 6.7
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 28 6.7
U88314-7|AAF99887.2| 294|Caenorhabditis elegans Pharyngeal glan... 28 8.9
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 28 8.9
U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 28 8.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical ... 28 8.9
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 28 8.9
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 35.9 bits (79), Expect = 0.034
Identities = 22/73 (30%), Positives = 29/73 (39%)
Frame = -1
Query: 469 EHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRIS 290
+H H G HDHGGH H + H H G HDH + + + +G
Sbjct: 23 DHGGGDHGG---HDHGGHD-HGGHDHGGHDHGGWGGHDHHDHHHGGWGGHDHDHGNGGGG 78
Query: 289 NDHGRNSRLFFKF 251
D+G R F F
Sbjct: 79 GDNGWGYRPFTGF 91
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 6/58 (10%)
Frame = -1
Query: 454 GHNGRVSHDHGG------HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDG 299
G G SH HGG H H H+ G G H H Y+ S + YY G
Sbjct: 179 GGGGGGSHHHGGGGGGGGHHHHGGGGHYHGGGGGFHHHHHSSYSGSSSDYSSNNYYGG 236
>U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical
protein ZK1290.6 protein.
Length = 507
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = -1
Query: 472 DEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDG 299
+E + G G HGGH G H G +GG H G+ RS + + Y G
Sbjct: 41 EEQRSTGGKGGGGGSHGGHGGSHGGSHGGHGSHGGSYGGHSGHGRSFSTSSGSSGYRG 98
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -1
Query: 451 HNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYTRSLGNNYRARYYDGRISNDHG 278
H+ H H G H H GH+G SH H G+ S G+ + A + G +HG
Sbjct: 555 HHSPAHHGHHGEHHHAPAHHGHHGHHG--SHGVHHGHHESHGHGHHAPAHHGH-HGEHG 610
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = -1
Query: 472 DEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNG-----GVSHDHRG 347
+ H A H+G +HG H GH H A H+G G H H G
Sbjct: 508 EHHHAPAHHGHHG-EHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHG 553
Score = 31.5 bits (68), Expect = 0.72
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = -1
Query: 466 HWARGHNGRVSHDHGGHQGHVTNVHWA--RGHNG--GVSHDHRG 347
H GH+G HG H+ H H GH+G GV H H G
Sbjct: 574 HGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHG 617
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -1
Query: 472 DEHWARGHNGRVSH--DHGGHQGHVTNVHWARGHNGGVSHDHRG 347
+ H A H+G H HG H GH + H GH+ H H G
Sbjct: 566 EHHHAPAHHGHHGHHGSHGVHHGHHES-H-GHGHHAPAHHGHHG 607
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = -1
Query: 469 EHWARGHNGRVSHDHGGHQGHVTNVHWARGHNG-GVSHDHRGYTRSLGNNYRARYYDGRI 293
EH H+ +HG H GH H A H+G SH H ++ + ++ ++
Sbjct: 408 EHHGTHHSPAHHGEHGTHHGHHGEHHHAPAHHGHHESHGHGHHSPAHHGHHGEHHHAPAH 467
Query: 292 SNDHGRN 272
HG +
Sbjct: 468 HGHHGEH 474
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = -1
Query: 454 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYTRSLGNNYRARYYDGRISNDHG 278
GH+G HG H + H H G H H G+ N++ ++ H
Sbjct: 668 GHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKENHHHHGHHSKHSKKQHT 727
Query: 277 RNS 269
+ S
Sbjct: 728 KKS 730
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/46 (28%), Positives = 17/46 (36%)
Frame = -1
Query: 466 HWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLG 329
H G +G HG H + H H+ H H G+ S G
Sbjct: 539 HGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHHGSHG 584
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -1
Query: 472 DEHWARGHNGR-VSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 347
+ H A H+G SH HG H + H H+ H H G
Sbjct: 431 EHHHAPAHHGHHESHGHG-HHSPAHHGHHGEHHHAPAHHGHHG 472
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 454 GHNGRVSH-DHGGHQGHVTNVHWARGHNGGVS-HDHRGYTRSLGNNYRARYYDGRISNDH 281
GH H DHG GH + H + GH+ + HDH G++ N+ + N H
Sbjct: 360 GHGHSHDHNDHGHSHGHDDHGHDSHGHSHDHNEHDH-GHSHGGNNDNHGHSHSAGSDNHH 418
Query: 280 GRN 272
G +
Sbjct: 419 GHS 421
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 454 GHNGRVSH-DHGGHQGHVTNVHWARGHNGGVS-HDHRGYTRSLGNNYRARYYDGRISNDH 281
GH H DHG GH + H + GH+ + HDH G++ N+ + N H
Sbjct: 378 GHGHSHDHNDHGHSHGHDDHGHDSHGHSHDHNEHDH-GHSHGGNNDNHGHSHSAGSDNHH 436
Query: 280 GRN 272
G +
Sbjct: 437 GHS 439
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 31.5 bits (68), Expect = 0.72
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 472 DEHWARGHNGRVSHDHG-GHQGHVTNVHWARGHNGGVSHDHRGYT 341
D A H+ +HDHG H H + H+ G +HDH G++
Sbjct: 77 DHGHAHDHDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHGHS 121
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -1
Query: 436 SHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNY---RARYYDGRISNDHGRN 272
+HDHG H + H+ G +HDH G++ ++ A + G DHG +
Sbjct: 75 AHDHG----HAHDHDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHGHSHEDHGHS 128
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 31.1 bits (67), Expect = 0.96
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 439 VSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 347
V H GGH GHV H H+G H G
Sbjct: 35 VVHTDGGHHGHVDTHHHEESHHGEHHGGHHG 65
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = -1
Query: 466 HWARGHNGRVSHDH--GGHQGHV-TNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGR 296
H A G+ H H GGH GH+ T+ H H+GG H G+ G +Y + Y
Sbjct: 25 HGAPGYMPPTVHVHTDGGHHGHMDTHHHHDSHHHGG---HHGGHH---GGHYESHYESHH 78
Query: 295 ISNDHGRN 272
HG +
Sbjct: 79 HHGHHGHH 86
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = -1
Query: 466 HWARGHNGRVSHDHGGHQGHVTNVHWARGHNG-GVSHDHRGYTRSLGNNYRARYYDGRIS 290
H + + R H HGGH GH + G +G G S HRG G + R G
Sbjct: 291 HGSCSGSPRGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGRH--GGHGRHGSRSGSPG 348
Query: 289 NDHGRNSR 266
HG R
Sbjct: 349 GRHGHGGR 356
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -1
Query: 466 HWARGHNGRVSHDHGGHQGHVTNVHWARGHNG-GVSHDHRG 347
H +R + H HGGH GH + G +G G S HRG
Sbjct: 242 HGSRSGSPGGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRG 282
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = -1
Query: 454 GHNGRVSHDH--GGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNN--YRARYYDGRISN 287
GH GR H G H H + H RGH G H G++ ++DGR +
Sbjct: 352 GHGGRHGPPHCPGRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPS 411
Query: 286 DHGRN 272
HG +
Sbjct: 412 RHGHH 416
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = -1
Query: 466 HWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVS-HDHRGYTRSLGNNYRARYYDGRIS 290
H G +G S GG GH + H G +GG H R + + + R+
Sbjct: 304 HGGHGGHGSRSGSPGGRHGHGGSGHHRGGRHGGHGRHGSRSGSPGGRHGHGGRHGPPHCP 363
Query: 289 NDHGRN 272
HGR+
Sbjct: 364 GRHGRH 369
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 430 DHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYR-ARYYDGRISNDHGRN 272
+H Q H ++R N G ++H G R NN R R Y+ R ++++ +N
Sbjct: 46 NHQYQQSHPRRTSFSRDGNTGYYNNHSGNKRQTYNNQRGGRSYNHRGNSNYQQN 99
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform a protein.
Length = 1113
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 430 DHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYR-ARYYDGRISNDHGRN 272
+H Q H ++R N G ++H G R NN R R Y+ R ++++ +N
Sbjct: 46 NHQYQQSHPRRTSFSRDGNTGYYNNHSGNKRQTYNNQRGGRSYNHRGNSNYQQN 99
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = -1
Query: 469 EHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRIS 290
++W G N + GG G +N W G N ++ R NN Y + +
Sbjct: 198 DNWNSGSNSGGYNGGGGGSGGGSN--WNNGDNENDGWNNNNNNRKSNNNNNNNYGNSWGT 255
Query: 289 NDHGRNS 269
ND+ NS
Sbjct: 256 NDNDGNS 262
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = -1
Query: 469 EHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRIS 290
++W G N + GG G +N W G N ++ R NN Y + +
Sbjct: 198 DNWNSGSNSGGYNGGGGGSGGGSN--WNNGDNENDGWNNNNNNRKSNNNNNNNYGNSWGT 255
Query: 289 NDHGRNS 269
ND+ NS
Sbjct: 256 NDNDGNS 262
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = -2
Query: 384 GATMAGSATITGATLGPSAT---ITGLGTMMAGSAMI----TGETAGFSSNLIV 244
G+T++GS TG+T P +T TG+ T+ S TG T SS++ V
Sbjct: 766 GSTVSGSTGSTGSTNNPGSTDSSTTGISTVSGSSLSTISGSTGSTVSGSSDMTV 819
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -2
Query: 384 GATMAGSATITGATLGPSATITGLGTMMAGSAMITGETA 268
G+T+ G +T++G+T S+ TG T AGS ++G +A
Sbjct: 1021 GSTVTGESTVSGSTASTSSGSTGSST-EAGST-VSGSSA 1057
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -1
Query: 460 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLG-NNYRARYYDGRISN 287
+ G NGR ++ G TN + + HN +H G R G N + Y +G+ SN
Sbjct: 484 SNGSNGRWRGNN--RNGATTNGYGYQQHNNRQNHYQNGQQRENGENGHHNHYQNGQSSN 540
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -1
Query: 460 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLG-NNYRARYYDGRISN 287
+ G NGR ++ G TN + + HN +H G R G N + Y +G+ SN
Sbjct: 386 SNGSNGRWRGNN--RNGATTNGYGYQQHNNRQNHYQNGQQRENGENGHHNHYQNGQSSN 442
>U88314-7|AAF99887.2| 294|Caenorhabditis elegans Pharyngeal gland
toxin-relatedprotein 1 protein.
Length = 294
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = -1
Query: 166 CPGTRGPTWTGDGTMGAST----RAGPTSGLS*CP 74
CP T G T T +ST R PT+G+S CP
Sbjct: 171 CPRTCGRCSTSSSTTSSSTTCADRVNPTTGVSDCP 205
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -1
Query: 472 DEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTR 338
D+H GH R S H GHQ + H GH + DH + +
Sbjct: 141 DDH--HGHEKRSSDSHHGHQKRSVDEH--HGHQKKNAEDHHEHQK 181
>U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical
protein R04E5.8b protein.
Length = 142
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = -1
Query: 460 ARGHNGRVSHDHGGHQGHVTNVHWARG-HNGGVSHDHRGYTRSLGNNY---RARYYDGRI 293
AR HN H+ G H G N + R H + H+ RS +N R + +D
Sbjct: 61 ARAHNRGQHHNRGHHHGPPRNHNQDRNRHRNHDGNRHQNQDRSRHHNQDRNRRQNHDRNR 120
Query: 292 SNDHGRN 272
GRN
Sbjct: 121 HQSQGRN 127
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = -1
Query: 460 ARGHNGRVSHDHGGHQGHVTNVHWARG-HNGGVSHDHRGYTRSLGNNY---RARYYDGRI 293
AR HN H+ G H G N + R H + H+ RS +N R + +D
Sbjct: 905 ARAHNRGQHHNRGHHHGPPRNHNQDRNRHRNHDGNRHQNQDRSRHHNQDRNRRQNHDRNR 964
Query: 292 SNDHGRN 272
GRN
Sbjct: 965 HQSQGRN 971
>AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical
protein H05C05.1b protein.
Length = 219
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -1
Query: 454 GHNGRVSH-DHGGHQGHVTNVHWAR---GHNGGVSHDHRGYTRSLGNNYR 317
GH +V DHG HQ T+ ++ G GG +HR Y +S Y+
Sbjct: 76 GHIDKVPRGDHGDHQEMDTSTTSSKSGGGGGGGHQKNHRKYDQSSSQRYQ 125
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -1
Query: 454 GHNGRVSH-DHGGHQGHVTNVHWAR---GHNGGVSHDHRGYTRSLGNNYR 317
GH +V DHG HQ T+ ++ G GG +HR Y +S Y+
Sbjct: 580 GHIDKVPRGDHGDHQEMDTSTTSSKSGGGGGGGHQKNHRKYDQSSSQRYQ 629
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,480,882
Number of Sequences: 27780
Number of extensions: 215836
Number of successful extensions: 916
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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