Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0807
(799 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 26 0.35
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 26 0.35
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 4.3
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 5.7
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 5.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 5.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 7.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 7.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 7.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 7.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 7.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 7.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 7.6
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 7.6
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 7.6
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 26.2 bits (55), Expect = 0.35
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 397 VHWARGHNGGVSHDHRGYT 341
+HW GHNGG S GYT
Sbjct: 1422 LHWKSGHNGGAS--LTGYT 1438
Score = 24.2 bits (50), Expect = 1.4
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2
Query: 537 HWARGHNGGVA 505
HW GHNGG +
Sbjct: 1423 HWKSGHNGGAS 1433
Score = 22.2 bits (45), Expect = 5.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1
Query: 466 HWARGHNGRVS 434
HW GHNG S
Sbjct: 1423 HWKSGHNGGAS 1433
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 26.2 bits (55), Expect = 0.35
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 397 VHWARGHNGGVSHDHRGYT 341
+HW GHNGG S GYT
Sbjct: 1418 LHWKSGHNGGAS--LTGYT 1434
Score = 24.2 bits (50), Expect = 1.4
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2
Query: 537 HWARGHNGGVA 505
HW GHNGG +
Sbjct: 1419 HWKSGHNGGAS 1429
Score = 22.2 bits (45), Expect = 5.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1
Query: 466 HWARGHNGRVS 434
HW GHNG S
Sbjct: 1419 HWKSGHNGGAS 1429
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 4.3
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = -1
Query: 379 HNGGVSHDHRGYTRSLGNNYRARYYD 302
+N ++++ Y + NNY+ YY+
Sbjct: 330 NNNNYNNNYNNYNNNNYNNYKKLYYN 355
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.2 bits (45), Expect = 5.7
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 75 GHYESPDVGPALVEAPIVPSPVHVGPLVP 161
G++ +GP + +P H+GPL P
Sbjct: 125 GNFPPRPMGPWISIQEQIPRFRHIGPLTP 153
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.7
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -1
Query: 361 HDHRGYTRSLGNNYRARYYD 302
H++ Y + NNY+ YY+
Sbjct: 91 HNNNNYNNNNYNNYKKLYYN 110
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 5.7
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 75 GHYESPDVGPALVEAPIVPSPVHVGPLVP 161
G++ +GP + +P H+GPL P
Sbjct: 366 GNFPPRPMGPWISIQEQIPRFRHIGPLTP 394
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 75 GHYESPDVGPALVEAPIVPSPVHVGPLVP 161
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 75 GHYESPDVGPALVEAPIVPSPVHVGPLVP 161
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 75 GHYESPDVGPALVEAPIVPSPVHVGPLVP 161
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 75 GHYESPDVGPALVEAPIVPSPVHVGPLVP 161
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 75 GHYESPDVGPALVEAPIVPSPVHVGPLVP 161
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 75 GHYESPDVGPALVEAPIVPSPVHVGPLVP 161
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 75 GHYESPDVGPALVEAPIVPSPVHVGPLVP 161
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 75 GHYESPDVGPALVEAPIVPSPVHVGPLVP 161
G++ S +GP + +P H+GP P
Sbjct: 133 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 161
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 7.6
Identities = 6/20 (30%), Positives = 12/20 (60%)
Frame = -1
Query: 361 HDHRGYTRSLGNNYRARYYD 302
+++ Y + NNY+ YY+
Sbjct: 335 NNYNNYNNNYNNNYKKLYYN 354
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,898
Number of Sequences: 438
Number of extensions: 2840
Number of successful extensions: 28
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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