Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0806
         (397 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   0.58 
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   0.76 
U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    23   4.1  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   4.1  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   5.4  
CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply, Sphingosine...    22   7.1  
DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.        22   9.4  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    22   9.4  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.8 bits (54), Expect = 0.58
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 79   GSERPQDAAENADFSFSGTD*C*NSG 2
            GSE+P++A E +  + SGTD   +SG
Sbjct: 1348 GSEKPKNAIEPSQEAVSGTDNANDSG 1373



 Score = 23.8 bits (49), Expect = 2.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 205 QSLRTRSWTSRQQLPREIPVYLT 273
           QS+RT  W+S  + P +  +YLT
Sbjct: 53  QSMRTNRWSSHPEAPGK-AIYLT 74


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.4 bits (53), Expect = 0.76
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 276 LRSRGQPCSGVRRPTRHQQITVNYSNDTCESK 371
           L +   P  G RRPT++QQI   +++D  E++
Sbjct: 16  LANEFNPNRGRRRPTKNQQIYGVWADDDSENE 47


>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
 Frame = -2

Query: 315 GDVLQNTADLGCVVRQVDRDLSRKLL--TAGPTSRPKRLIWRLDLTSP-IVIAAPMSLTM 145
           GDV+Q +  +      VD D +++ +  TA P +    ++ R  L +  IV AAP++  +
Sbjct: 46  GDVVQGSYSV------VDPDGTKRTVDYTADPHNGFNAVVRREPLAAKTIVAAAPVATKV 99

Query: 144 MLSARETEAVASATTFSRASPPEAK 70
           +       A   A T S A+P   K
Sbjct: 100 IAQPAVAYAAPVAKTISYAAPVATK 124



 Score = 22.2 bits (45), Expect = 7.1
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 264 LPDGLRSRGQPCSGVRR 314
           LP   RSR +P  GVRR
Sbjct: 3   LPRSPRSRTRPARGVRR 19


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 121  SGSLSNDVLKGKSSGSERPQDAAENADFSFSGTD 20
            S ++ ND +K  +SGS + Q   E   F F   D
Sbjct: 1270 SVTIKNDPMK--TSGSTQQQQQMERQQFGFGNND 1301


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = -1

Query: 319 VGRRTPEHG*PRLRSP--SGRQGSL 251
           VG++ P  G P LR+P  +G  GS+
Sbjct: 20  VGKQLPASGIPTLRAPMAAGNAGSV 44


>CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply,
           Sphingosine-phosphate lyase protein.
          Length = 519

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +1

Query: 178 WRCQI*PPNQSLRTRSWTSRQQLPREIPVYLTDYAAEVSRV 300
           W CQ+    +SL  R+     +L R IP       AE+ ++
Sbjct: 37  WLCQVLFQEESLYRRAKKKVFKLARLIPAVRRRVDAEIEKI 77


>DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 4/101 (3%)
 Frame = -2

Query: 321 ELGDVLQNTADLGCVVRQVDRDLSRKLLTAGPTSRP-KRLIWRLDLTSPIVIA---APMS 154
           EL D   N      +V          L+T G + R    L+  LD+     I     P +
Sbjct: 67  ELVDYNPNVTTTNIIVSPFSAWNLLTLITEGASGRTLDELLVALDVQQQEQIRNYYKPFA 126

Query: 153 LTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPS 31
            +  L  R+ +  A+    +  + P +KD  + L    SPS
Sbjct: 127 QSFSLLDRDVQLAAAQYVITDENRPVSKDFESALDNFYSPS 167


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 211 LRTRSWTSRQQLPREIPVYLTDYAAEVSRVLEYVAQL 321
           L+  +   R+QL RE+    + YA E  R+ E   +L
Sbjct: 710 LKRHTQQRREQLQRELNELNSAYAKEDERLQEMTRKL 746


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 349,931
Number of Sequences: 2352
Number of extensions: 7077
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31212099
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)