Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0806
         (397 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p...    29   1.2  
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr...    29   1.2  
U67953-4|AAL13329.1|  732|Caenorhabditis elegans Hypothetical pr...    28   2.1  
Z99269-1|CAB16467.1| 1461|Caenorhabditis elegans Hypothetical pr...    27   3.7  
U21308-15|AAB93316.2|  412|Caenorhabditis elegans Hypothetical p...    27   3.7  
U41034-4|AAY43995.1|  385|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr...    27   6.4  
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr...    27   6.4  
AF016670-9|AAB66107.2|  701|Caenorhabditis elegans Hypothetical ...    27   6.4  
AF068721-9|AAC19265.1|  570|Caenorhabditis elegans Hypothetical ...    26   8.5  

>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical
           protein C18D4.2b protein.
          Length = 1376

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = +3

Query: 180 AMSNLTSKSISSDAKL--DQPSTTS*RDPCLPDGLRSRGQPCSGVRRPTRHQQITVNYSN 353
           ++S+    S+S++A L  D PST+  + P   +   S     S + R   ++Q  ++  N
Sbjct: 498 SLSDSKDDSLSNEANLQNDLPSTSDSKTPTSRERSESSESNISNILRELENEQSLLDSKN 557

Query: 354 DTCESKINYVLLKL 395
           D+   +    +LKL
Sbjct: 558 DSSNPEYMMKMLKL 571


>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical
           protein C18D4.2a protein.
          Length = 1817

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = +3

Query: 180 AMSNLTSKSISSDAKL--DQPSTTS*RDPCLPDGLRSRGQPCSGVRRPTRHQQITVNYSN 353
           ++S+    S+S++A L  D PST+  + P   +   S     S + R   ++Q  ++  N
Sbjct: 498 SLSDSKDDSLSNEANLQNDLPSTSDSKTPTSRERSESSESNISNILRELENEQSLLDSKN 557

Query: 354 DTCESKINYVLLKL 395
           D+   +    +LKL
Sbjct: 558 DSSNPEYMMKMLKL 571


>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
           protein C18D4.2b protein.
          Length = 1376

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = +3

Query: 180 AMSNLTSKSISSDAKL--DQPSTTS*RDPCLPDGLRSRGQPCSGVRRPTRHQQITVNYSN 353
           ++S+    S+S++A L  D PST+  + P   +   S     S + R   ++Q  ++  N
Sbjct: 498 SLSDSKDDSLSNEANLQNDLPSTSDSKTPTSRERSESSESNISNILRELENEQSLLDSKN 557

Query: 354 DTCESKINYVLLKL 395
           D+   +    +LKL
Sbjct: 558 DSSNPEYMMKMLKL 571


>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical
           protein C18D4.2a protein.
          Length = 1817

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = +3

Query: 180 AMSNLTSKSISSDAKL--DQPSTTS*RDPCLPDGLRSRGQPCSGVRRPTRHQQITVNYSN 353
           ++S+    S+S++A L  D PST+  + P   +   S     S + R   ++Q  ++  N
Sbjct: 498 SLSDSKDDSLSNEANLQNDLPSTSDSKTPTSRERSESSESNISNILRELENEQSLLDSKN 557

Query: 354 DTCESKINYVLLKL 395
           D+   +    +LKL
Sbjct: 558 DSSNPEYMMKMLKL 571


>U67953-4|AAL13329.1|  732|Caenorhabditis elegans Hypothetical
           protein ZC13.3 protein.
          Length = 732

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 272 RTTQPRSAVFWSTSPNSSSTDYCKLL 349
           +T++PR +  W+T+P     DYC +L
Sbjct: 523 QTSKPRKST-WTTTPEPKQDDYCDIL 547


>Z99269-1|CAB16467.1| 1461|Caenorhabditis elegans Hypothetical
           protein W10C6.1 protein.
          Length = 1461

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
 Frame = -2

Query: 267 VDRDLSRKLLTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETEAVASATTFSRA 88
           +DRDLSRKLL    + +      RLDL    +I   + +   +  R T  VA      RA
Sbjct: 246 LDRDLSRKLLIKWRSVKRDVDTERLDLDRKEMIDVAIFMLDNVGVRVTNVVAQ----ERA 301

Query: 87  SPPE---AKDLRTRL 52
             PE    K +R R+
Sbjct: 302 DSPEGHGGKQMRPRM 316


>U21308-15|AAB93316.2|  412|Caenorhabditis elegans Hypothetical
           protein ZK1290.10 protein.
          Length = 412

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = -2

Query: 198 RLDLTSPIVIAAPMSLTMM-LSARETEAVASATTFSRASPPEAK 70
           RLD T P+  A P+ L ++ ++ +E +  AS T+   A+PP A+
Sbjct: 59  RLDNTIPVPPALPIGLPIIQITTKEPQPPASLTSLP-AAPPSAQ 101


>U41034-4|AAY43995.1|  385|Caenorhabditis elegans Hypothetical
           protein M02D8.7 protein.
          Length = 385

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 222 SRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETE 121
           S PK  I R++  SP+V  AP+ +  +L    TE
Sbjct: 330 SDPKTYIARIEALSPVVRMAPLRILDILERTRTE 363


>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical
           protein F22G12.5 protein.
          Length = 2396

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -2

Query: 267 VDRDLSRKLLTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETEAVA 112
           VDR  SR LL   PT+   R +W +     I+ A   +   M S+ + +AVA
Sbjct: 611 VDRAASRALLQLPPTTVNHRDLWIVCRVDRILSADTAAELYMKSSSDPKAVA 662


>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical
           protein F22G12.5 protein.
          Length = 2396

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -2

Query: 267 VDRDLSRKLLTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETEAVA 112
           VDR  SR LL   PT+   R +W +     I+ A   +   M S+ + +AVA
Sbjct: 611 VDRAASRALLQLPPTTVNHRDLWIVCRVDRILSADTAAELYMKSSSDPKAVA 662


>AF016670-9|AAB66107.2|  701|Caenorhabditis elegans Hypothetical
           protein K02F6.9 protein.
          Length = 701

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +2

Query: 209 LFGREVGPAVNNFLERSLST*RTTQPRSAVFWSTSPNSSSTDYCKLLERYL 361
           + G E+G A ++F  R L        R   +W T  NSS+T+Y +L E+ L
Sbjct: 532 VIGHEIGHAFDHF-HRKLDE----SGRQQQYWFTETNSSNTEY-ELREKCL 576


>AF068721-9|AAC19265.1|  570|Caenorhabditis elegans Hypothetical
           protein ZK1055.7 protein.
          Length = 570

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 81  PEAKDLRTRLKMRISPSAEPTDAETLG 1
           P + D + R+K+ +SP+A P DAE  G
Sbjct: 491 PRSTDEKIRVKL-VSPAATPYDAEKAG 516


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,992,777
Number of Sequences: 27780
Number of extensions: 152739
Number of successful extensions: 561
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)