Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0805
(397 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1110 + 30973202-30973870 30 0.59
03_05_1122 + 30546314-30549277,30549615-30549693,30549857-305499... 30 0.59
01_07_0294 + 42571700-42573373,42573653-42573720,42573785-425738... 29 1.4
12_01_0506 + 4017568-4017716,4018171-4018474 29 1.8
10_08_0999 + 22121029-22121235,22121819-22122082,22122123-221223... 29 1.8
03_02_0114 + 5704002-5704037,5704547-5704666,5705040-5705076,570... 29 1.8
02_01_0503 + 3669758-3670059,3670351-3670870 29 1.8
06_01_0554 - 3945185-3945665,3946122-3947011,3947635-3947967 28 2.4
12_02_0959 + 24818310-24818369,24818689-24819136,24819265-248194... 28 3.1
01_06_0034 + 25769436-25769701,25769749-25769887 28 3.1
12_01_0149 - 1150949-1151041,1151145-1151190,1151343-1151460,115... 27 4.1
02_05_1057 + 33809982-33810366,33810436-33810687,33810727-338109... 27 4.1
02_05_1074 - 33904518-33904697,33904886-33904985,33905085-339053... 27 5.5
09_02_0067 - 3812508-3813158,3813944-3814030,3814124-3814312,381... 27 7.2
07_01_0677 + 5087584-5087589,5088890-5089172,5093561-5093704,509... 27 7.2
06_03_1409 - 29966787-29966990,29967150-29967413,29968098-299682... 27 7.2
06_01_0336 + 2427017-2427121,2427585-2427662,2427889-2427960,242... 27 7.2
05_01_0019 - 129767-129931,130078-130257,130491-130728,130833-13... 27 7.2
01_04_0149 - 16826019-16826023,16826065-16826635 27 7.2
09_02_0047 - 3528462-3528986,3531432-3531818 26 9.6
03_05_0892 + 28563151-28563669,28563977-28564035,28564170-285642... 26 9.6
03_05_0851 + 28225608-28226570 26 9.6
03_05_0373 + 23581812-23583293 26 9.6
03_01_0233 + 1833473-1833814,1833910-1834045,1834820-1834953,183... 26 9.6
>04_04_1110 + 30973202-30973870
Length = 222
Score = 30.3 bits (65), Expect = 0.59
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 195 LDLTSPIVIAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEP 22
L + + + +P S T+ S+R+T A A ++A P + L L M +A+P
Sbjct: 97 LPKAAALAVVSPTSSTVESSSRDTPAAAPVAAAAKAQVPASPSLDLSLGMSAMVAAQP 154
>03_05_1122 +
30546314-30549277,30549615-30549693,30549857-30549945,
30550422-30550538,30550873-30551111,30552279-30552365,
30552732-30552831,30553319-30553532,30553617-30553777
Length = 1349
Score = 30.3 bits (65), Expect = 0.59
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = -1
Query: 229 SNFASEEIDLEVRFDIANSYCSSDVTDN---DVVCEGDGSGSLSNDVLKGKSSG 77
SN +D E +A C D+ + D++ EGD G L+ D + G
Sbjct: 54 SNSMKMHVDAETAGGVALDVCKGDILEKKQCDIIAEGDRGGVLTVDTCNAEEDG 107
>01_07_0294 +
42571700-42573373,42573653-42573720,42573785-42573819,
42573988-42574061,42574491-42574726,42574958-42575044,
42575356-42575455,42575584-42576003
Length = 897
Score = 29.1 bits (62), Expect = 1.4
Identities = 22/87 (25%), Positives = 37/87 (42%)
Frame = -2
Query: 330 VDDELGDVLQNTADLGCVVRQVDRDLSRKLLTAGPTSRPKRLIWRLDLTSPIVIAAPMSL 151
VDD++ NT D DL +K A P + + + +S A+P +
Sbjct: 291 VDDDVNQPSSNTD----AQSNADDDL-KKAAVASPAATRSKTRSKCKTSSNSAAASPSAR 345
Query: 150 TMMLSARETEAVASATTFSRASPPEAK 70
+ ++AR+ + T + PPEAK
Sbjct: 346 SSAIAARKKNNATATGTTATPPPPEAK 372
>12_01_0506 + 4017568-4017716,4018171-4018474
Length = 150
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = -1
Query: 247 EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLK-GKSSGS 74
++ DG ++ ++ E D+E++ D Y + DV + V E GSG V + G++SGS
Sbjct: 89 DLCDGSADNSNYEADMELKVDSEEEYVNMDVEVD--VGEATGSGCKGKAVEEHGEASGS 145
>10_08_0999 +
22121029-22121235,22121819-22122082,22122123-22122324,
22122456-22122590,22122668-22122778,22122871-22122959,
22123237-22123299,22123461-22123636,22123785-22123887,
22124286-22124461,22124625-22124733,22124851-22124943,
22126294-22126435,22126655-22126671
Length = 628
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -2
Query: 312 DVLQNTADLGC-VVRQVDRDLSRKLLTAGPTSRPKRLIWRLDLTSPIVIAAPMS 154
++ +NTAD VV R ++ + T GP++ + +IW+L T V MS
Sbjct: 70 NIAENTADATSQVVSANSRRKTKIVCTIGPSTNTREMIWKLAETGMNVARMNMS 123
>03_02_0114 +
5704002-5704037,5704547-5704666,5705040-5705076,
5705905-5705981,5706642-5706755,5706902-5706969,
5707051-5707129,5707367-5707511,5707627-5707731,
5707917-5707994,5708192-5708247,5708533-5708651,
5708853-5709096,5709203-5709385,5709956-5710264,
5710350-5710399,5711042-5711102,5711184-5711267,
5711461-5711577,5711665-5711831,5711938-5712010,
5712497-5712581,5712693-5712886,5713073-5713228
Length = 918
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -1
Query: 214 EEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSER-PQDAAENADF 38
EE D E+ D+ + CSSD + + D S NDV SG + +D ++ ++
Sbjct: 419 EEYD-EIFDDLEDGSCSSDAYTDSEDGDVDKEYSTDNDVDGSYDSGEDNIEEDMEDDTEY 477
Query: 37 SFSGTD 20
S G++
Sbjct: 478 SSGGSE 483
>02_01_0503 + 3669758-3670059,3670351-3670870
Length = 273
Score = 28.7 bits (61), Expect = 1.8
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +2
Query: 119 ASVSLA-DNIIVSDIG-AAITIGDVKSNLQINLFGREVGPAVNNFLERSLST*RTTQPRS 292
ASV+LA D + S G A +GDV + L ++FG+E+ P+ + FL + RT +P+
Sbjct: 204 ASVALATDGVASSHHGDAQAQLGDVVAALAASVFGQELFPS-SPFLGALGTNERTCRPQE 262
Query: 293 AVFWSTSPNSS 325
+ +P +
Sbjct: 263 RTAPARTPKGN 273
>06_01_0554 - 3945185-3945665,3946122-3947011,3947635-3947967
Length = 567
Score = 28.3 bits (60), Expect = 2.4
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +2
Query: 119 ASVSLADNIIVSDIGAAITIGDVKSNLQI----NLFGREVGPAVNNFLERSLST*RTT 280
+ V++ +N+ + +G A + D +L + N FGR G AV+ +L RS + RTT
Sbjct: 361 SGVTVLNNL--AQVGIAAGVADTTISLALFSFGNFFGRLGGGAVSEYLVRSRTLPRTT 416
>12_02_0959 +
24818310-24818369,24818689-24819136,24819265-24819482,
24819651-24819929
Length = 334
Score = 27.9 bits (59), Expect = 3.1
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -1
Query: 283 LRSPSGRQGSL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVV---CEGDGSGS 113
L+SPSG + G + A E I D A ++ ++ +ND++ C G G+GS
Sbjct: 40 LKSPSGETWRV-----GVAKVADELILKSGWEDFAKAH---ELQENDLLFFTCNGHGNGS 91
Query: 112 LSNDVLKGKSSGSER 68
S DVL +SG E+
Sbjct: 92 CSFDVLIFDASGCEK 106
>01_06_0034 + 25769436-25769701,25769749-25769887
Length = 134
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 160 DVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAE 50
+V +D +C+G+G G + G ++ RPQ A E
Sbjct: 16 EVESSDTICQGEGPGEGGHPDPAGPAAALLRPQVAGE 52
>12_01_0149 -
1150949-1151041,1151145-1151190,1151343-1151460,
1151541-1151637,1151711-1151908,1152024-1152086,
1152384-1152443,1152558-1152660,1154398-1154507
Length = 295
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = -1
Query: 235 GWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSE 71
GWSN D D+A + S + +D+ E +L D+LK + SE
Sbjct: 66 GWSNLVCSREDHAKSVDVAVLFLGSKLQSSDISKEKQADSTLV-DMLKNSFASSE 119
>02_05_1057 +
33809982-33810366,33810436-33810687,33810727-33810926,
33811021-33811122
Length = 312
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 145 DVVCEGDGSGSLSNDVLKGKSSGSERPQDAA 53
+V C G G G+++ D +G SG R DAA
Sbjct: 120 NVGCIGGGGGNITVDGFRGGGSGGGRGGDAA 150
>02_05_1074 - 33904518-33904697,33904886-33904985,33905085-33905311,
33905511-33908384,33908467-33908643,33908786-33909008,
33909727-33909806,33910657-33910817,33910892-33910937,
33911129-33911251,33911730-33911804,33911920-33912120
Length = 1488
Score = 27.1 bits (57), Expect = 5.5
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = -1
Query: 271 SGRQGSL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLK 92
S R GSL V G + ++ I++S SS D++ D SGS + L
Sbjct: 1004 SDRHGSLSSSVPGIRTRENHFSNMHRDGSISDSMNSSSSIPGDIISNSDNSGSFTRPALS 1063
Query: 91 GKSSGSER 68
++S R
Sbjct: 1064 LETSWKPR 1071
>09_02_0067 -
3812508-3813158,3813944-3814030,3814124-3814312,
3814475-3814603,3814917-3815003,3815126-3815563
Length = 526
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 282 SRGQPCSGVRRPTRHQQITVNYSND-TCESKINY 380
S G PC +R P+ H TVN D E K+ Y
Sbjct: 150 SNGYPCPPMRNPSDHFLRTVNKDFDKESEEKLQY 183
>07_01_0677 +
5087584-5087589,5088890-5089172,5093561-5093704,
5094167-5095269
Length = 511
Score = 26.6 bits (56), Expect = 7.2
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +2
Query: 284 PRSAVFWSTSPNSS 325
PRS + WS+SPNS+
Sbjct: 116 PRSIILWSSSPNSA 129
>06_03_1409 -
29966787-29966990,29967150-29967413,29968098-29968241,
29969000-29969329
Length = 313
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 5 RVSASVGSAEGEIRIFSRVLRSFASGGLALENVVAEATASVSLADNIIVSDIGAAITIGD 184
R+ +V + EG RI + + GG++ + A A + + + VS + + GD
Sbjct: 60 RLEEAVPAGEGRSRIDAWISARLGGGGVSRARIQASIRAGLVVVNGRPVSKVSHMVKGGD 119
Query: 185 VKS 193
+ S
Sbjct: 120 IVS 122
>06_01_0336 +
2427017-2427121,2427585-2427662,2427889-2427960,
2428105-2428671,2428822-2428935,2431308-2432246
Length = 624
Score = 26.6 bits (56), Expect = 7.2
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = -2
Query: 234 AGPTSRPKRLIWRLDLTSPIVIAAPMSLTMMLSAR--ETEAVASATTFSRASPPEA 73
A TS P LDLTSP A LS R T ++ TFS + P A
Sbjct: 398 AAITSTPSYPTITLDLTSPAAAATSSHAAFSLSNRFSHTRYPSTGFTFSGSGPSSA 453
>05_01_0019 -
129767-129931,130078-130257,130491-130728,130833-131236,
131284-131427,131709-131995,132071-132150,132563-132714,
132793-132909,133292-133450,133546-133946,134106-134423,
135050-135095,135203-135310
Length = 932
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -1
Query: 190 FDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKG 89
F+ + D D D+ C G G +ND +KG
Sbjct: 213 FEFTGMSTNQDDADEDIFCTGGGMELENNDSVKG 246
>01_04_0149 - 16826019-16826023,16826065-16826635
Length = 191
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 115 SLSNDVLKGKSSGSERPQDAAENADFSFS 29
+LS + +KGK +G+E QD + +F FS
Sbjct: 89 TLSEEGIKGKLNGAEITQDEYASDEFHFS 117
>09_02_0047 - 3528462-3528986,3531432-3531818
Length = 303
Score = 26.2 bits (55), Expect = 9.6
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 68 SFASGGLALENVVAEATASVSLADNI 145
SFAS G L+N+ A+ ++++L+ I
Sbjct: 113 SFASAGTGLDNITAQILSAMTLSQQI 138
>03_05_0892 +
28563151-28563669,28563977-28564035,28564170-28564295,
28564460-28564595,28564901-28565209
Length = 382
Score = 26.2 bits (55), Expect = 9.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 195 LDLTSPIVIAAPMSLTMMLSARETEAVASATTFSRASPPE 76
LDL + P S ML +ETE++A S +P E
Sbjct: 279 LDLMEQEELTLPPSQQKMLRVKETESLADHQKLSAGNPQE 318
>03_05_0851 + 28225608-28226570
Length = 320
Score = 26.2 bits (55), Expect = 9.6
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -1
Query: 151 DNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENA 44
D VCE DGS SLS D GK P D A
Sbjct: 109 DASSVCEEDGSSSLSVD---GKQQQHSNPADRGGGA 141
>03_05_0373 + 23581812-23583293
Length = 493
Score = 26.2 bits (55), Expect = 9.6
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +2
Query: 23 GSAEGEIRIFSRVLRSFASGGLA-----LENVVAEATASVSLADNIIVSDIGAAITIG 181
GSA+G ++++ R ASGG A LE V+ E ++V+ I VS G + +G
Sbjct: 282 GSADGTVKVWRREEEPAASGGEAKTRHVLETVLREDESAVTA---IAVSAEGRVVYVG 336
>03_01_0233 +
1833473-1833814,1833910-1834045,1834820-1834953,
1835379-1835484,1836339-1836424,1836816-1837004,
1837131-1837322,1837407-1837520,1837614-1837910
Length = 531
Score = 26.2 bits (55), Expect = 9.6
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +2
Query: 2 PRVSASVGSAEGEIRIFSRV----LRSFASGGLALENVVAEA 115
P +A+ G GE+ F+ LR+ A+GG A EN+V+E+
Sbjct: 37 PGSAAAQGVGRGEVPAFAEFSLAELRA-ATGGFAAENIVSES 77
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,514,816
Number of Sequences: 37544
Number of extensions: 185395
Number of successful extensions: 753
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -