Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0805
(397 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13710| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.0
SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29) 29 1.0
SB_56858| Best HMM Match : AT_hook (HMM E-Value=3.7) 29 1.4
SB_52167| Best HMM Match : Extensin_2 (HMM E-Value=3.6) 29 1.4
SB_39727| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_35595| Best HMM Match : AT_hook (HMM E-Value=3.7) 29 1.4
SB_34667| Best HMM Match : AT_hook (HMM E-Value=3.7) 29 1.4
SB_32994| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11) 29 1.4
SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_2435| Best HMM Match : WD40 (HMM E-Value=4.1e-10) 29 1.4
SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_42564| Best HMM Match : zf-DHHC (HMM E-Value=3.4) 29 1.4
SB_42307| Best HMM Match : AT_hook (HMM E-Value=3.7) 29 1.4
SB_33158| Best HMM Match : rve (HMM E-Value=7.5e-05) 29 1.4
SB_769| Best HMM Match : Retrotrans_gag (HMM E-Value=0.32) 29 1.4
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_40649| Best HMM Match : AT_hook (HMM E-Value=3.7) 28 2.4
SB_23956| Best HMM Match : AT_hook (HMM E-Value=3.7) 28 3.2
SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_38556| Best HMM Match : RVP (HMM E-Value=1.4) 27 4.2
SB_23813| Best HMM Match : RVT_1 (HMM E-Value=0.00037) 27 4.2
SB_8085| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_43706| Best HMM Match : RVP (HMM E-Value=1.4) 27 4.2
SB_38461| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=6.5) 27 4.2
SB_22574| Best HMM Match : RVP (HMM E-Value=1.4) 27 4.2
SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014) 27 4.2
SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8) 27 5.5
SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_43634| Best HMM Match : Sushi (HMM E-Value=1.2e-16) 27 7.3
SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_39656| Best HMM Match : ATP_bind_3 (HMM E-Value=0.79) 26 9.6
SB_39376| Best HMM Match : Alpha-amylase_C (HMM E-Value=0.49) 26 9.6
SB_49322| Best HMM Match : REV (HMM E-Value=4.5) 26 9.6
SB_36862| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.6
SB_2516| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.6
SB_2502| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.6
>SB_13710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 819
Score = 29.5 bits (63), Expect = 1.0
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 77 SGGLALENVVAEATASVSLADNIIVSDIGAAITIGDVKSNLQIN 208
SGG L A+A +VSL+D+ S A I++ D++ +LQ++
Sbjct: 665 SGGRTLVQAAADAALAVSLSDH--CSQPSAPISLYDLRDSLQVH 706
>SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)
Length = 1544
Score = 29.5 bits (63), Expect = 1.0
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 160 DVTDNDVVCEGDGSGSLS-NDVLKGKSSGSERPQDAAENADFSFSGTD 20
DV+D D V +GD G+ + +DV G S G + +++ D S D
Sbjct: 166 DVSDGDDVSDGDVDGANNCDDVSNGASDGDDVSNGSSDGDDVSNGAND 213
>SB_56858| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 100
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 234 PSTTS*RDP---CLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 359
P+T + DP C+PD QP RRPTR + Y +T
Sbjct: 42 PTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 86
>SB_52167| Best HMM Match : Extensin_2 (HMM E-Value=3.6)
Length = 287
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 234 PSTTS*RDP---CLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 359
P+T + DP C+PD QP RRPTR + Y +T
Sbjct: 229 PTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 273
>SB_39727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 234 PSTTS*RDP---CLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 359
P+T + DP C+PD QP RRPTR + Y +T
Sbjct: 201 PTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 245
>SB_35595| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 214
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 234 PSTTS*RDP---CLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 359
P+T + DP C+PD QP RRPTR + Y +T
Sbjct: 156 PTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 200
>SB_34667| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 240
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 234 PSTTS*RDP---CLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 359
P+T + DP C+PD QP RRPTR + Y +T
Sbjct: 182 PTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 226
>SB_32994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 234 PSTTS*RDP---CLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 359
P+T + DP C+PD QP RRPTR + Y +T
Sbjct: 604 PTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 648
>SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11)
Length = 1213
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 234 PSTTS*RDP---CLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 359
P+T + DP C+PD QP RRPTR + Y +T
Sbjct: 1155 PTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 1199
>SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1269
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 234 PSTTS*RDP---CLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 359
P+T + DP C+PD QP RRPTR + Y +T
Sbjct: 1211 PTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 1255
>SB_2435| Best HMM Match : WD40 (HMM E-Value=4.1e-10)
Length = 1272
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 234 PSTTS*RDP---CLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 359
P+T + DP C+PD QP RRPTR + Y +T
Sbjct: 1214 PTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 1258
>SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 234 PSTTS*RDP---CLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 359
P+T + DP C+PD QP RRPTR + Y +T
Sbjct: 617 PTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 661
>SB_42564| Best HMM Match : zf-DHHC (HMM E-Value=3.4)
Length = 162
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 285 GCVVRQVDRDLSRKLLTAGPTSRPKRLIWRLDLTSPIVIAAPM 157
GC VR VD L R + GPT ++W +T PI + P+
Sbjct: 123 GCTVRFVDSCLYRIITAHGPT-----IVWVTTITKPISSSRPV 160
>SB_42307| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 269
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 234 PSTTS*RDP---CLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 359
P+T + DP C+PD QP RRPTR + Y +T
Sbjct: 211 PTTQANNDPVFSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 255
>SB_33158| Best HMM Match : rve (HMM E-Value=7.5e-05)
Length = 848
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 234 PSTTS*RDP---CLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 359
P+T + DP C+PD QP RRPTR + Y +T
Sbjct: 790 PTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 834
>SB_769| Best HMM Match : Retrotrans_gag (HMM E-Value=0.32)
Length = 500
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 234 PSTTS*RDP---CLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 359
P+T + DP C+PD QP RRPTR + Y +T
Sbjct: 442 PTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 486
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -1
Query: 184 IANSYCSSDVTDNDV-VCEGDGSGSLSNDVLKGKSSGSERPQDAA 53
+ +S+ + TD D + +G+GSGS N + G +GS +++A
Sbjct: 695 LVDSHTPKEFTDTDAKLLQGEGSGSQHNVMRGGSGAGSGNLKESA 739
>SB_40649| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 240
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 234 PSTTS*RDP---CLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 359
P+T + DP C+PD QP RRPTR + Y +T
Sbjct: 182 PTTQANNDPVPSCMPDASSQAPQPPHEPRRPTRARTRPKRYEPET 226
>SB_23956| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 240
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 234 PSTTS*RDP---CLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 359
P+T + DP C+PD QP +RPTR + Y +T
Sbjct: 182 PTTQANNDPVSSCMPDASSQAPQPLPEPKRPTRARTRPKRYEPET 226
>SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1505
Score = 27.5 bits (58), Expect = 4.2
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = +2
Query: 8 VSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--NIIVSDIGA 166
VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +I V
Sbjct: 344 VSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKNDIAVRPAKG 403
Query: 167 AITIGD 184
I +GD
Sbjct: 404 QIILGD 409
>SB_38556| Best HMM Match : RVP (HMM E-Value=1.4)
Length = 230
Score = 27.5 bits (58), Expect = 4.2
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = +2
Query: 8 VSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--NIIVSDIGA 166
VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +I V
Sbjct: 100 VSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKNDIAVRPAKG 159
Query: 167 AITIGD 184
I +GD
Sbjct: 160 QIILGD 165
>SB_23813| Best HMM Match : RVT_1 (HMM E-Value=0.00037)
Length = 1283
Score = 27.5 bits (58), Expect = 4.2
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = +2
Query: 8 VSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--NIIVSDIGA 166
VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +I V
Sbjct: 356 VSQADGSSQLHVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKNDIAVRPAKG 415
Query: 167 AITIGD 184
I +GD
Sbjct: 416 QIILGD 421
>SB_8085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 27.5 bits (58), Expect = 4.2
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = +2
Query: 8 VSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSL--ADNIIVSDIGA 166
VS + GS++ GE R+ F+R +SF+ GL +EN+ E A ++I V
Sbjct: 21 VSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMETNDIAVRPAKG 80
Query: 167 AITIGD 184
I +GD
Sbjct: 81 QIILGD 86
>SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1586
Score = 27.5 bits (58), Expect = 4.2
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = +2
Query: 8 VSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--NIIVSDIGA 166
VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +I V
Sbjct: 402 VSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKNDIAVRPAKG 461
Query: 167 AITIGD 184
I +GD
Sbjct: 462 QIILGD 467
>SB_43706| Best HMM Match : RVP (HMM E-Value=1.4)
Length = 577
Score = 27.5 bits (58), Expect = 4.2
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = +2
Query: 8 VSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--NIIVSDIGA 166
VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +I V
Sbjct: 355 VSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKNDIAVRPAKG 414
Query: 167 AITIGD 184
I +GD
Sbjct: 415 QIILGD 420
>SB_38461| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=6.5)
Length = 207
Score = 27.5 bits (58), Expect = 4.2
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 5 RVSASVG-SAEGEIRIFSRVLRSFASGGLALENVVAEATASVSLADNIIVSDIGAA 169
R +AS G + EIR+ + + GGLAL + AT L ++VS +G A
Sbjct: 19 RHTASFGHGGDKEIRVQYAEIVAAVLGGLALAWIADLATGRRGLGATVLVSGVGLA 74
>SB_22574| Best HMM Match : RVP (HMM E-Value=1.4)
Length = 382
Score = 27.5 bits (58), Expect = 4.2
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = +2
Query: 8 VSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--NIIVSDIGA 166
VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +I V
Sbjct: 252 VSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKNDIAVRPAKG 311
Query: 167 AITIGD 184
I +GD
Sbjct: 312 QIILGD 317
>SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014)
Length = 1212
Score = 27.5 bits (58), Expect = 4.2
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = +2
Query: 8 VSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--NIIVSDIGA 166
VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +I V
Sbjct: 365 VSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKNDIAVRPAKG 424
Query: 167 AITIGD 184
I +GD
Sbjct: 425 QIILGD 430
>SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8)
Length = 841
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = -1
Query: 187 DIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENAD 41
D N +++ DND E DG S +D+ G+ S E ++ + +
Sbjct: 413 DYNNMAACANIFDNDSDDEDDGQASGESDLSFGEESSDEEELESGDEGE 461
>SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 264 LPDGLRSRGQPCSG--VRRPTRHQQITVNYSNDT 359
+PD L +GQPC G P Q+TV+Y T
Sbjct: 342 VPDKLYIKGQPCLGKITSLPNTVGQLTVHYYTGT 375
>SB_43634| Best HMM Match : Sushi (HMM E-Value=1.2e-16)
Length = 986
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -1
Query: 199 EVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSG 77
++ F+ + +C++D D C GDG ++ KS G
Sbjct: 545 KIPFNSSLMFCANDGKDYKQTCRGDGGSPFISESYDRKSRG 585
>SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 848
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 279 RSRGQPCSGVRRPTRHQQIT--VNYSNDTCESKINYVLL 389
++R Q SGVR+ TRH +T + NDT + I +LL
Sbjct: 416 QARSQEGSGVRKKTRHSTVTSALIKENDTHTTFIFIMLL 454
>SB_39656| Best HMM Match : ATP_bind_3 (HMM E-Value=0.79)
Length = 492
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 187 DIANSYCSSDVTDNDVVCEGDGSGSLSNDV 98
+I+N C+S TDND E + SN++
Sbjct: 191 EISNETCNSTTTDNDCNSEANEDTRNSNEI 220
>SB_39376| Best HMM Match : Alpha-amylase_C (HMM E-Value=0.49)
Length = 679
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 187 DIANSYCSSDVTDNDVVCEGDGSGSLSNDV 98
+I+N C+S TDND E + SN++
Sbjct: 536 EISNETCNSTTTDNDCNSEANEDTRNSNEI 565
>SB_49322| Best HMM Match : REV (HMM E-Value=4.5)
Length = 156
Score = 26.2 bits (55), Expect = 9.6
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 330 VDDELGDVLQNTADLGCVVRQVDRDLSRKLLTAGPTSRPKRLIW 199
VD +LGD ADL + + D ++ KLL G + R W
Sbjct: 23 VDQQLGDPHMTVADLQERMARGDTTIANKLLYFGASLRGTSQYW 66
>SB_36862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 624
Score = 26.2 bits (55), Expect = 9.6
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -1
Query: 214 EEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAE 50
E D + FD ++ C D D D GD SL + +++ S +DAA+
Sbjct: 423 ENDDSQEPFDADSTACPKDDDDLDESLSGDSLDSLETSAKQVEATQSPYFKDAAQ 477
>SB_2516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 850
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 196 VRFDIANSYCSSDVTDNDVVCEGDGSGSL 110
V D+ YC++ + + CE GSGSL
Sbjct: 11 VLLDVLVLYCAAGNNERFIRCENTGSGSL 39
>SB_2502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 26.2 bits (55), Expect = 9.6
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -1
Query: 214 EEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSND 101
E+ D + DI N Y D D+D +GDG G D
Sbjct: 14 EDEDNDEDNDIDNGYDDDDKDDDDNDDDGDGDGDGDGD 51
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,773,561
Number of Sequences: 59808
Number of extensions: 207517
Number of successful extensions: 818
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 690807992
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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