Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0802
         (604 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3TIT7 Cluster: Putative protease; n=1; Janibacter sp. ...    33   6.9  
UniRef50_Q9W3W1 Cluster: CG4532-PA, isoform A; n=8; Endopterygot...    33   6.9  
UniRef50_UPI00004D89AA Cluster: UPI00004D89AA related cluster; n...    32   9.1  

>UniRef50_A3TIT7 Cluster: Putative protease; n=1; Janibacter sp.
           HTCC2649|Rep: Putative protease - Janibacter sp.
           HTCC2649
          Length = 525

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -2

Query: 237 GFGGRLNWSRDGIDWDGNGVNRGRNRVHWGRHVDWGQ 127
           G+G  + W + G+ W G GV  G+  V WG+ V WGQ
Sbjct: 160 GWGQGVGWGQ-GVGW-GQGVGWGQG-VGWGQGVGWGQ 193


>UniRef50_Q9W3W1 Cluster: CG4532-PA, isoform A; n=8;
           Endopterygota|Rep: CG4532-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 1074

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = -3

Query: 503 KFKQTIIFDQSNSSDSVQLFGKNHSRFRDNREDWFGQDHGLW*HDAG*RRLRQ 345
           K K   IFD   +   +QL  ++H   +D+R  W G  H +        RLRQ
Sbjct: 191 KDKNVRIFDPRAAGSPIQLTAESHQSIKDSRVVWLGNQHRILTTGFDAARLRQ 243


>UniRef50_UPI00004D89AA Cluster: UPI00004D89AA related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00004D89AA UniRef100 entry -
           Xenopus tropicalis
          Length = 350

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = -2

Query: 237 GFGGRLNWSRDGIDWDGNGVNRGRNRVHWGR-HVDWGQ 127
           G G    W R  + W  + V  GR+   WGR    WG+
Sbjct: 196 GGGSETGWGRSEVGWGRSEVGWGRSEAGWGRSEAGWGR 233


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 432,545,628
Number of Sequences: 1657284
Number of extensions: 6609154
Number of successful extensions: 16926
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16913
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)