Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0802
         (604 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003151-2|AAK18919.3|  277|Caenorhabditis elegans Prion-like-(q...    28   5.9  
U80023-1|AAG24037.1|  180|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>AF003151-2|AAK18919.3|  277|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 24
           protein.
          Length = 277

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -2

Query: 249 NNRFGFGGRLNWSRDGIDWDGNGVNRGRNRVHWGRHVDW 133
           NN    GG  +W     + + N  N G N   WG + DW
Sbjct: 125 NNNGASGG--SWGNGNANNNNNNNNGGSNNNGWGNNNDW 161


>U80023-1|AAG24037.1|  180|Caenorhabditis elegans Hypothetical
           protein F07C4.7 protein.
          Length = 180

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 243 RFGFGGRLNWSRDGIDWDGNGVNRGRNR 160
           R GFGG   W+  G  ++GNG   G  R
Sbjct: 51  RGGFGGNNGWNNGGGGFNGNGGFNGGGR 78


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,668,366
Number of Sequences: 27780
Number of extensions: 149103
Number of successful extensions: 340
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 340
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)