Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0800
         (796 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81133-3|CAB03443.3|  527|Caenorhabditis elegans Hypothetical pr...    29   5.1  
U55856-7|AAA98025.1|  249|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z81081-2|CAB03091.2|  451|Caenorhabditis elegans Hypothetical pr...    28   8.9  
U21309-6|AAT92086.1|  541|Caenorhabditis elegans Hypothetical pr...    28   8.9  
U21309-5|AAT92085.1|  536|Caenorhabditis elegans Hypothetical pr...    28   8.9  
U21309-4|AAN73883.1|  546|Caenorhabditis elegans Hypothetical pr...    28   8.9  
U00063-3|AAK18959.2|  446|Caenorhabditis elegans Hypothetical pr...    28   8.9  
AY314778-1|AAQ84885.1|  546|Caenorhabditis elegans calcitonin re...    28   8.9  
AY314777-1|AAQ84884.1|  541|Caenorhabditis elegans calcitonin re...    28   8.9  
AY314776-1|AAQ84883.1|  536|Caenorhabditis elegans calcitonin re...    28   8.9  

>Z81133-3|CAB03443.3|  527|Caenorhabditis elegans Hypothetical
           protein T28B8.5 protein.
          Length = 527

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -3

Query: 560 MFISTAATSLHCYIIVLFLIFFYC*T 483
           +F+  +  S   Y++++FL+FFYC T
Sbjct: 445 LFLGMSIISAIEYLVLIFLVFFYCCT 470


>U55856-7|AAA98025.1|  249|Caenorhabditis elegans Hypothetical
           protein F31E8.1 protein.
          Length = 249

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -1

Query: 769 CLSFVHHSPEWLNQFR*GIQFFIFLYYSVYNITKVY 662
           CL + H +P++   F   I FFIF   S  ++++V+
Sbjct: 155 CLFYTHSNPDFFIFFLFSISFFIFYATSSNSLSRVF 190


>Z81081-2|CAB03091.2|  451|Caenorhabditis elegans Hypothetical
           protein F42D1.3 protein.
          Length = 451

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 602 GWRFAHKNWRYISLMFISTAATSLHCYIIVLFLIFFY 492
           GW ++H NW Y S   +   A   +    V F I+F+
Sbjct: 211 GWIYSHGNWTYASSCVMMPTAILTNMGQTVYFNIYFW 247


>U21309-6|AAT92086.1|  541|Caenorhabditis elegans Hypothetical
           protein C13B9.4c protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 264 FWSRNGNTKLRLFICLFSICSVLLFIYIRMR 172
           FW  +G     L I LF IC+V+  +Y ++R
Sbjct: 332 FWILDGPRMAELVINLFFICNVIRVLYSKVR 362


>U21309-5|AAT92085.1|  536|Caenorhabditis elegans Hypothetical
           protein C13B9.4b protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 264 FWSRNGNTKLRLFICLFSICSVLLFIYIRMR 172
           FW  +G     L I LF IC+V+  +Y ++R
Sbjct: 322 FWILDGPRMAELVINLFFICNVIRVLYSKVR 352


>U21309-4|AAN73883.1|  546|Caenorhabditis elegans Hypothetical
           protein C13B9.4a protein.
          Length = 546

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 264 FWSRNGNTKLRLFICLFSICSVLLFIYIRMR 172
           FW  +G     L I LF IC+V+  +Y ++R
Sbjct: 332 FWILDGPRMAELVINLFFICNVIRVLYSKVR 362


>U00063-3|AAK18959.2|  446|Caenorhabditis elegans Hypothetical
           protein F56C9.3 protein.
          Length = 446

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 371 LETLELISQGVWRIYVLDVYGLQ*PLNTGW 460
           + +++LI   V RI+   VYG++ P+N  W
Sbjct: 216 MASVQLIISSVRRIHDAAVYGIKDPINVSW 245


>AY314778-1|AAQ84885.1|  546|Caenorhabditis elegans calcitonin
           receptor-like proteinSEB-1C protein.
          Length = 546

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 264 FWSRNGNTKLRLFICLFSICSVLLFIYIRMR 172
           FW  +G     L I LF IC+V+  +Y ++R
Sbjct: 332 FWILDGPRMAELVINLFFICNVIRVLYSKVR 362


>AY314777-1|AAQ84884.1|  541|Caenorhabditis elegans calcitonin
           receptor-like proteinSEB-1B protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 264 FWSRNGNTKLRLFICLFSICSVLLFIYIRMR 172
           FW  +G     L I LF IC+V+  +Y ++R
Sbjct: 332 FWILDGPRMAELVINLFFICNVIRVLYSKVR 362


>AY314776-1|AAQ84883.1|  536|Caenorhabditis elegans calcitonin
           receptor-like proteinSEB-1A protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 264 FWSRNGNTKLRLFICLFSICSVLLFIYIRMR 172
           FW  +G     L I LF IC+V+  +Y ++R
Sbjct: 322 FWILDGPRMAELVINLFFICNVIRVLYSKVR 352


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,361,011
Number of Sequences: 27780
Number of extensions: 380834
Number of successful extensions: 1079
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)